| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0897 |
|---|
| Symbol | |
|---|
| ID | 4182728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 987034 |
|---|
| End bp | 988272 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638066776 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_673459 |
|---|
| Protein GI | 110633251 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4235] Cytochrome c biogenesis factor |
|---|
| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.380164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCTTTG CCGGCAGTGA CGGCAGCGGA AAATGCCGCA TCGGTCGGCA GTTGGCACCG
CGCGGCAAGA CGGATATTGA ACTCAACATG TTTTTCTGGG TTCTCGCAGC ACTGCTAACC
CTTGCCGCCG CGCTGGCCGT GATGCGGCCG TTCTTGCGCG GGTTGACCAC AGATGTGGCG
GGCAGGGAGC ACGATCTTTC CGTTTATCGT GATCAGTTGG CCGAGCTGGA TCAGGAAGTA
AGGCGCGGGC TTGTGGCCGA GACGGAAGCG GCTGAGGCAC GCGCGGAAAT CGGCCGGCGC
ATTCTCCGGC TCTCGCAATC TGTCGATGAA AGCGCGGAAG GGTCAGTCAA ACCCGGTACG
AGGCTGGCGC GCGCGGTGGC CATAGCGGCC GTATTGGCTG TTCCGGCGAT AAGTTGGGGC
ATCTATTCCC TGATTGGCTC GCCCGGCCTG CCGGCCATGC CATTGCAGGC AAGGCTCAAC
GAGGACCCGG CGCAGGCGCC GGTGGAAGAC CTGGTCGCCC GCGCCGAGGC TTATCTGGCG
GATCACCCCG AAGACGTGCG CGGCTGGCAG ACGCTGGCGC CGGTCTATAT GCGGCTGGGG
CGCTATTCGG ATGCTGTGGC CGCCTATCAG CGGGCAATCG ACTTGGCTGG CGCCAACCCC
GAGTATGAAG CTGGCTTGGG CGAGGCGATG GTGGCGCGGA GCGGCGGGAT CGTCACGGCG
GGTGCCGAGG CGGCGTTTAA CCGCGCGCTG GCACTTGATG AGAAGAACGC TCGTGCACGC
TTCTTCATCG CCCTGGCGAG AGCGCAGGAA GGAAACGGGG GTGCGGCACG GGCTATTTGG
GAGGAGATGG CCTCCGGCCT CCCGGAACAG TCGCCATGGA AGGCTGCTGC CGCTCGAGCC
ATTGCGGGCC TCGCCCAGGA TTCGGCGCAG GCTTCCGCTT CAGAAAGCGC TCCATCACAA
GACCAGCTCG CAGCAGCTCA GGAGATGACA CCCGAAGCGC GCCAGGAGAT GATAGAAGGT
ATGGTGGCGA GCCTCGACGC GAAGCTGCGC GAGAGCCCGG CAGATCCGGA AGGCTGGGGG
CGCCTGCTGC GCTCCTATGT CGTGCTTGGC CGAAGGGACG ACGCGCTGGG GGCCCTGGAC
CGGGGACTTT CCGCCCTTGG ACCCGACTCG CCGGACGGCA AGGCTTTAAG TGAATTGGCC
GGGACGCTCG GCCTCACAGA CACGCAGGTG AATAAATGA
|
|---|
| Protein sequence | MLFAGSDGSG KCRIGRQLAP RGKTDIELNM FFWVLAALLT LAAALAVMRP FLRGLTTDVA
GREHDLSVYR DQLAELDQEV RRGLVAETEA AEARAEIGRR ILRLSQSVDE SAEGSVKPGT
RLARAVAIAA VLAVPAISWG IYSLIGSPGL PAMPLQARLN EDPAQAPVED LVARAEAYLA
DHPEDVRGWQ TLAPVYMRLG RYSDAVAAYQ RAIDLAGANP EYEAGLGEAM VARSGGIVTA
GAEAAFNRAL ALDEKNARAR FFIALARAQE GNGGAARAIW EEMASGLPEQ SPWKAAAARA
IAGLAQDSAQ ASASESAPSQ DQLAAAQEMT PEARQEMIEG MVASLDAKLR ESPADPEGWG
RLLRSYVVLG RRDDALGALD RGLSALGPDS PDGKALSELA GTLGLTDTQV NK
|
|---|
| |