Gene Meso_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0883 
Symbol 
ID4180498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp974771 
End bp976915 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content63% 
IMG OID638066764 
Product1A family penicillin-binding protein 
Protein accessionYP_673448 
Protein GI110633240 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGAGA AGCGTACGCC GAAGAAGGGA AATACACCGA GGGCCACGAT CTTCCTCGAC 
ATAGATGCGT GGATCGATTC CACCCTCTAT GAGCTGCGTT TCAAAGCCGC CGAGTTCTGG
GAAGACCTCA CCGTCTTCTT CCGCCGCTTC CGCTTCTACG GCTTAAGGCG CGCCGTCATC
GAATTCTTCA GCGAAGGGGT CACCATGCTG GCCGCGGGCT CGGTGGTTAT GCTGGGTCTT
GCCATACCCG CCTTCCAGGA GACAGCGGGC GACTGGCGCG CGCAGGACGA TTATGCCGTC
ACCTTTCTTG ACCGCTACGG GCAGGAGATC GGCCAGCGCG GCATCCGCCA GCGCGATTCC
GTGCCGGTCG ACGAGATGCC CGACCATGTG GTCAAGGCTG TCCTGGCCAC GGAAGACCGG
CGCTTCTTCG AGCATTTCGG GATTGATTTC GTCGGCCTGT TCCGCGCGCT TTCTGAGAAC
ATGCGCGCCA ATTCCGTGGT GCAGGGCGGC TCCACCATCA CGCAGCAGCT TGCGAAAAAC
CTGTTCCTCA CCAATGAGCG CACGGTGGAG CGCAAGATCA AGGAAGCATT TCTCGCCGTC
TGGCTGGAAG CCAATCTGAC GAAAAAAGAG ATCCTGCAGC TTTATCTCGA CCGCGCTTAT
CTCGGCGGCG GCACTTTCGG CATCTCCGCC GCGGCCGATT TCTATTTCGG CAAGCAGGTC
AAGGACCTCA CATTGCCCGA GGCGGCCATG ATCGCCGGCC TCTTCAAGGC TCCCGCGCGC
TATGCGCCGC ATATCAATCT TCCCGCCGCG CGCGCCCGCG CCAATGAGGT GCTCAGCAAT
CTCGTCCAGT CCCGCTTCAT GACGGAGGGG CAGGTGCTTT CGGCCCGGCT CAATCCGGCG
ACTGCGGTGG ACCGCGGCGA CCGCGAGGCG CCCGACTATT TCCTGGATTG GGCGTTCGAG
GAGGTGAAGA AGATCGTGCC GGAGGGCGCA ACCCATTCGC TGGTGGCGCG CACGACCATG
GACCTTGACC TGCAGCATGC GGTCGAGGAA TCGATCGAAT TTCATCTGCG CCAATACGGC
AAGGATTACG ACGTGGAGGA AGGCGCCGCT ATCCTCATGG ATACGGACGG CGCGGTACGC
GCGCTGGTCG GCGGGCGGGA CTACGGCCAG AGCCAGTTCA ACCGCGCAAC GCGCGCCGCG
CGCCAGCCAG GTTCCTCCTT CAAGCCCTAT GTCTACGCGG CCGCCATGGA AGCGGGTTTG
ACGCCGAAGA CCGTTGTTTC CGACGCGCCC ATATCCTGGG GCAACTGGTC GCCGCAGAAT
TACGGGCGCA GCTATGCCGG CCGCGTCGAC CTCGCGACAG CGCTCGCAAG GTCCTACAAC
ACGGTCCCCG TCCGCCTGGC GCGCGACCAT CTGGGCATCG ATGTCATCCA GAAGCTGGTG
AAAGATATGG GCGTGGAAAC GCCGCTCAAC GGCCATAAGA CCATGGTGCT GGGCACGTCC
GATCTGACGG TGCTGGATCA GGTGACCGGA TACAGCGTTT TCGCCAATGG CGGCTTTGCC
GGCACACGTC ACGGCATCCT GGAACTGCAT ACTCACACCG GCGAACTCGT TTACGATTGG
CGGCGCGATG CGCCGCCGCC ACGCCGCGTC CTTTCCGAAA CGGCCGTTTC GAACATGAAC
AGCATGCTGG TTGAGGTGCC GGAGCGCGGC ACGGCCCGGC GCGCGGCCCT TCCCAATATC
CGCTCCGCGG GGAAAACCGG CACGACCCAG TCCTATCGCG ATGCCTGGTA TGTCGGTTAC
ACCGGAAATT ATGTCGCCGC CGTCTGGCTC GGCAATGACG ATTACAGGCC AACCGACAAT
ATGACCGGCG GCACGCTGCC GGCCATGGTC TGGCAACGCT TCATGGCCTA TGCCCACCAG
AACCTCGAGT TGAAACCTAT TCCGGGCATC GAAAATCCGC TGCCCGCCAA GAGCGACGAG
GCCGTGGCGG CTGCCAAAAC CGAGGGTGTG GAGGCCGGTC CGCGCCGGCC GGCGCATAGC
CTGCCGCTTG CCACCCGCAC CGTGCTGAAC GATCTGCTCG GGCTCTTCCG CCAGGCGCCC
CCCGTCAAGC CTCGCCGCGT CTCCGAAAAC CTGTCGGCTC TTTGA
 
Protein sequence
MVEKRTPKKG NTPRATIFLD IDAWIDSTLY ELRFKAAEFW EDLTVFFRRF RFYGLRRAVI 
EFFSEGVTML AAGSVVMLGL AIPAFQETAG DWRAQDDYAV TFLDRYGQEI GQRGIRQRDS
VPVDEMPDHV VKAVLATEDR RFFEHFGIDF VGLFRALSEN MRANSVVQGG STITQQLAKN
LFLTNERTVE RKIKEAFLAV WLEANLTKKE ILQLYLDRAY LGGGTFGISA AADFYFGKQV
KDLTLPEAAM IAGLFKAPAR YAPHINLPAA RARANEVLSN LVQSRFMTEG QVLSARLNPA
TAVDRGDREA PDYFLDWAFE EVKKIVPEGA THSLVARTTM DLDLQHAVEE SIEFHLRQYG
KDYDVEEGAA ILMDTDGAVR ALVGGRDYGQ SQFNRATRAA RQPGSSFKPY VYAAAMEAGL
TPKTVVSDAP ISWGNWSPQN YGRSYAGRVD LATALARSYN TVPVRLARDH LGIDVIQKLV
KDMGVETPLN GHKTMVLGTS DLTVLDQVTG YSVFANGGFA GTRHGILELH THTGELVYDW
RRDAPPPRRV LSETAVSNMN SMLVEVPERG TARRAALPNI RSAGKTGTTQ SYRDAWYVGY
TGNYVAAVWL GNDDYRPTDN MTGGTLPAMV WQRFMAYAHQ NLELKPIPGI ENPLPAKSDE
AVAAAKTEGV EAGPRRPAHS LPLATRTVLN DLLGLFRQAP PVKPRRVSEN LSAL