| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0837 |
|---|
| Symbol | |
|---|
| ID | 4179670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 928942 |
|---|
| End bp | 929868 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638066717 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_673402 |
|---|
| Protein GI | 110633194 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.033112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGGC TCAAGCTCAG CCATTTCCGC CTTATCGCCG CCGTTGCGGA GCACGGCCAG
CTCAGCCCGG CGGCGGCATC GCTCTCCATG ACGCAACCGG CAGCCTCGCG CATGTTGAGG
GAGATCGAAA GGCTTATCGG CGTCCCTCTT TTCGAGCGGC ACGCCAAGGG CATGAGCCTG
ACGGAGGTCG GCGGGCTGCT GGCGCGACAT GCCGAAACGC TGCTCACCGA AATCCGAGAA
ACCGTCATTG AGGTTGAGGA ATTCAAGCTC GGCAAGGGCG GGCGGGTGCG CGTCGGCGCC
GTTACGGGAG CGGCGGTGGG CTATGTGATG CCCGCGATTC AGAAACTGAA GGCCACTTCG
CCCAATGCAG ACGTGCATAT CGACGTGGCA CCGAGCGACA CCCTGATCCC CGAACTCGTC
TCAGGCCATC TCGATTTCGT GCTCGGCCGC GTGCCACCGC CTTTTGATCC GCGTAGTTTT
GTCGTTTCCC GCGGAAGAAA CGAGATCGTC GACCTGGTGG TGAGGCGAAA TCATCCGCTT
GCGGGGGCCA ATGCCATCTC GATCGGCGAG CTCAGCGACT ACGAGTGGGT GTTGCAGTCA
AGCGGCGCAC CTTTGCGCGT GGTCGTGGAG CAGGCGTTTC TGGCCGCCGG AGGCACATTG
CCCCGCAACA TCATCAACAC GACCTCGCTC CTGGCGATGA TTGCGCTGCT CGTCACCTCG
GACGCAATCG CGCCGCTGTC GCGGGAAGTC TCGGATCTCC TCGGGGGAAA CAGCGGGGGG
CTGGGGCTTG CTGTTCTGCC CATCCGCGAG GCGCTGGTCG TCGCTCCTTA CCACCTGCTT
TCGCTCAAGA GCCGGCCTCT ATCGCCGCTG GCCTCAAGAC TGAAAGAGCT TATCCTGCTG
GAACTTGGGG GTTATGATCG GCCTTGA
|
|---|
| Protein sequence | MSRLKLSHFR LIAAVAEHGQ LSPAAASLSM TQPAASRMLR EIERLIGVPL FERHAKGMSL
TEVGGLLARH AETLLTEIRE TVIEVEEFKL GKGGRVRVGA VTGAAVGYVM PAIQKLKATS
PNADVHIDVA PSDTLIPELV SGHLDFVLGR VPPPFDPRSF VVSRGRNEIV DLVVRRNHPL
AGANAISIGE LSDYEWVLQS SGAPLRVVVE QAFLAAGGTL PRNIINTTSL LAMIALLVTS
DAIAPLSREV SDLLGGNSGG LGLAVLPIRE ALVVAPYHLL SLKSRPLSPL ASRLKELILL
ELGGYDRP
|
|---|
| |