| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0826 |
|---|
| Symbol | |
|---|
| ID | 4179659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 914691 |
|---|
| End bp | 915764 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638066706 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_673391 |
|---|
| Protein GI | 110633183 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTA TTGCGCTAGC GAAAATCGAG AAAAGATTCG GCGGCCAGAA CGGCATCCTC
GTGCTCGATG GGCTCGACCT TACGATCGCG GAAGGCGAGT CCTATGTGCT GCTCGGCCAG
TCCGGCTGCG GCAAGACGAC GACGCTGCGC ATGATTGCGG GGCTGGAGGA GCCCACCGGC
GGCGAAATGA CTCTGAATGG CAGCCCGGTC TATTCTCGCG CGAACCGGAT ATGGGTCGCT
CCCGAGCGGC GTCCCATCGG CATGGTGTTC CAGTCCTACG CCCTCTGGCC CACCATGACG
GTCATGCAGA ACGTCCGGTT CACCCTCGAA CGCGGGCGCA CACGGCTTTC ACGCGCAGAG
GCCATGGCGC GCACCCGGGA GGTGCTCGAC ATGATGCAGA TCGGCCATCT GGCCGATCGT
CGCATAACCC AGCTTTCGGG CGGACAGCAA CAGCGCGTGG CCCTGGCGCG CGCCGTGGCC
CAGCAGCCCC GGATTCTGCT GATGGACGAA CCGCTCTCCA ATCTTGATCC GCAGTTGCGT
TCCGACGTGC GCGGCGAAAT CCGCAAGGTC TGCAAGAGCC TGGGAACCAC AGCGGTGATC
GTCACCCATG ACCGCGACGA CGCGCTGGGG CTGGCCGATC GCGTGGGGGT GATGGACAGG
GGCAAAATCC TGCAGCAGGC CGCCCCCTCG GAGGTAATGA ACGATCCCAG CTCGCTGTTC
ATCGCTCGTC TGTTCGGGGA AATGAACGCC CTCGATGGGC ATGTCGCGTC CTTCGCGGAC
GGGAATGCGG TGGTCGCGGT GGGGAGCCGG CCATTCCCGG TAAAGCGGCA CGCATGGATG
GAACTGGGCC AGAAGGTGGT GCTCGGCGCA CGCCCATCGA GCCAGTTCCT CGCGCAGGAT
GGCATCGCCG GCATCATCGT GGAAAGCCAT CTCGAAGGTC AGATGCACCG CAACAAGGTC
GATATCGGAG AGGGCGTGAT GACCATATAT CACGAGGGAG CCGCCCTGCC GGTCGGCGAG
CGCGTGCATG TGGCCACGCG GCCGGAGGCT TGGATGGCAT TTCCGGCCCG TTGA
|
|---|
| Protein sequence | MTAIALAKIE KRFGGQNGIL VLDGLDLTIA EGESYVLLGQ SGCGKTTTLR MIAGLEEPTG
GEMTLNGSPV YSRANRIWVA PERRPIGMVF QSYALWPTMT VMQNVRFTLE RGRTRLSRAE
AMARTREVLD MMQIGHLADR RITQLSGGQQ QRVALARAVA QQPRILLMDE PLSNLDPQLR
SDVRGEIRKV CKSLGTTAVI VTHDRDDALG LADRVGVMDR GKILQQAAPS EVMNDPSSLF
IARLFGEMNA LDGHVASFAD GNAVVAVGSR PFPVKRHAWM ELGQKVVLGA RPSSQFLAQD
GIAGIIVESH LEGQMHRNKV DIGEGVMTIY HEGAALPVGE RVHVATRPEA WMAFPAR
|
|---|
| |