| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0803 |
|---|
| Symbol | |
|---|
| ID | 4181063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 891998 |
|---|
| End bp | 892567 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638066683 |
|---|
| Product | thiamine pyrophosphate enzyme-like TPP-binding |
|---|
| Protein accession | YP_673368 |
|---|
| Protein GI | 110633160 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAC GTGATCAGGT CCTCAAAATC CTCGCGCGTC ATCTCGATCG GGAGATCGTC
ATCGGCGCAT ACAGCACCGC CTTCGATTGG ATCGCCACGC GTCCGGGCCA TCCTCTGAAT
TTCACGTCCG TCGGTGCGAT GGGCCTCGCC TCCTCGCATG GCCTCGGCTT TGCCATCGCG
TGCCCAGACC GGAAGGTCAT CGTTCTTGAC GGTGACGGCA GCCTGCTCAT GAACCTCGGA
AGCCTGGTGA CGATCGCCGC CGCGGCACCG GCCAACCTCC TGCACTTCGT TTTCGAGAAC
GGCACATACG AAGCCAATGG CGGCCATCCC ATTCCAGGTC AGGGCCGCGT GGATTTCGCG
GGCATGGCGC GCTCTGCAGG CTACGCCGCC GTCTACCGCT TCGAGGATCT CGGCACTTTC
GAGACCGGAA TAAAAGAGGT TTTGCAACAA CCGGGTCCAG TCTTCGCCGA CCTCAAGGTC
GTACCGGGCG CGGACAGCCC GCGCGATTAT GCGGAACTCT ACGATCCGGG AAAGCGCGAC
GCTCTGCGCG CCGAGTTGCG GCGCGGTTAG
|
|---|
| Protein sequence | MMKRDQVLKI LARHLDREIV IGAYSTAFDW IATRPGHPLN FTSVGAMGLA SSHGLGFAIA
CPDRKVIVLD GDGSLLMNLG SLVTIAAAAP ANLLHFVFEN GTYEANGGHP IPGQGRVDFA
GMARSAGYAA VYRFEDLGTF ETGIKEVLQQ PGPVFADLKV VPGADSPRDY AELYDPGKRD
ALRAELRRG
|
|---|
| |