| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0787 |
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| Symbol | |
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| ID | 4181047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 865471 |
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| End bp | 866748 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638066667 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_673352 |
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| Protein GI | 110633144 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.155072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTGA CCTTATTCCT GGTCTTCTTC GCCTGCCTGC TGATCGGTGT TCCGATCGGC
TTCGGCATGG GTTTCGCTTC TATGGTCGCG ATCGCCCTTC ATGGCAGTTT CCCCATGGAG
GTCATTCCCC ATAAGATGGC GAATGCCGTC AATTCCTTTC CGCTGGTGGC GTTGCCGCTG
TTCATTCTCG CAGGCGCGCT GGCAGGGGAA ACGAGCATCG CGGGTCGGCT CGTCCGCTTC
GCCGATGCCC TGTTCGGGCA TATCCGCGGC GGCCTCGGCC ACGTGAACGT CGCCTCGTCG
ATGTTCTTCG GTGGCATTTC GGGTTCGGCG GTCGCCGACA CGGCCGCAAT CGGCAGCCTC
ATGATCCCGG CCATGGAAAA GCAGGGCTAC AAACGCGCCG ATGCGGGCGC GATTACCATC
TGCTCTTCCG TCATCGGCGT GCTGATCCCG CCGAGCATTC CCATGGTTCT CTACGGCGTG
ACAGTCGGCA CCTCTATCGG GTCGCTGTTC CTTGCCGGAA TCGTGCCCGG CGTACTGGTC
GGCGTTTTCC TGATGGCGGC CGTGTTCTTC ATGTCGAAAA AGAAGGGCTG GCCGCGGCGG
GAACACCGCG CGCCCGCAGG TGAGCTCTGG TCAGCGTTCA AGCAGGCGAT CCTGCCGCTG
CTGCTGCCGG TCTTCCTGCT CGGAGCGATC GTTTCCGGCC TCACCACCGC CACCGAGGCA
GGCGTTATCG GCGTGGTTTA TGCGCTGATC CTCGGCGGCT TCGTCTACCG CGATCATACG
CTGCCGGACC TCTTCCGCAT CGCGGTCGAC GCGGCAATCA GCACTGCGAT TCCGGTCTTC
GTCCTGGCCA CCACCTCGGT TGCGGCCTGG ATCATCGCCA TCGAGCAATT CCCGGCGGCG
CTGGCTGGCT TCTTCTCGGA GATGGCTTTC GGCAAGATAA TCGTCCTCCT CGTCATCAAC
TTGTTCCTGA TGCTGGTTGG CATGGTGATG GATCTGGTTC CCGCCCTGAT CCTGTTCGCA
CCGATCCTGC TGCCGGTGGC GCAGGAGGCT GGCATGGATG CGATCCAGTT CGGCGTGTTG
ATGGTGGTGA ACCTCGGCGT CGGACTGGTG ACACCGCCGG TGGGCAACTG CCTCTATCTC
GGGGCGGTGG TCGCCCGTGT CGATCTCTCC TCCCTGATCC GCGCGAGCCT GCCCTTCCTG
ATGGTCAACT TATTCGTGCT GCTGCTGGTC ACCTATGTGC CGCAGCTCAG CACCTTCCTC
CCATCCCTCT TCTACTGA
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| Protein sequence | MILTLFLVFF ACLLIGVPIG FGMGFASMVA IALHGSFPME VIPHKMANAV NSFPLVALPL
FILAGALAGE TSIAGRLVRF ADALFGHIRG GLGHVNVASS MFFGGISGSA VADTAAIGSL
MIPAMEKQGY KRADAGAITI CSSVIGVLIP PSIPMVLYGV TVGTSIGSLF LAGIVPGVLV
GVFLMAAVFF MSKKKGWPRR EHRAPAGELW SAFKQAILPL LLPVFLLGAI VSGLTTATEA
GVIGVVYALI LGGFVYRDHT LPDLFRIAVD AAISTAIPVF VLATTSVAAW IIAIEQFPAA
LAGFFSEMAF GKIIVLLVIN LFLMLVGMVM DLVPALILFA PILLPVAQEA GMDAIQFGVL
MVVNLGVGLV TPPVGNCLYL GAVVARVDLS SLIRASLPFL MVNLFVLLLV TYVPQLSTFL
PSLFY
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