| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0779 |
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| Symbol | |
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| ID | 4180296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 855169 |
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| End bp | 857103 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638066658 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_673344 |
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| Protein GI | 110633136 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.649745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGA GAAGCCTCGT CGAGTGGCTG CACATGCGCT CGCGCCGGAC CAAAAGAGCC
ATGCTGCTGT CTGCAGACGT GGTTGGCCTG ATGGCCATCA TCTGGCTTGC CTTCTGCTTC
CGTTTCAACC AGTTCTTCAT TCCCAATCTC GAGCAGACGC TTTTGATCCT GGCTGCGCCG
GTCATTGCCA TCCCCATCTT CATCCGGATG GGCCTTTACC GGGCGGTTCT GCGGTACCTG
CAGGAACAGG CGATATGGAC AATGATCCGG GCGGTGACCT TCTCCAGCCT GGCATGGGTT
GGGCTCGCCT TCATTACCTT ATCCTACGGC GCGGACGGCG TTCCGCGCAC GATCGCTGTC
CTCTATTGGG CTGGAAGTCT TGTCAGCGTG GTCGGCAGCC GCCTCGGCAT CAAATGGCTG
CTCAACGGGC GCATCTCTCA TGCCGCGCAT AAAAAGCGGG TCCTCGTTTA TGGCGCTGGG
GATGCGGCGA TGCAGCTGGC GGAAGCGCTC AGCGCCTCCG GTGACCGTCA GGTCGTCGGC
ATCGTCAGCG ATGATTCCGG CCTGCATGGG ATGGAGATCG TCGGCATCCG GGTCTATCCC
GCCGAACAGC TCGAAGACCT GGTTCTCGAC ACGGAGGCGC AGGAGGTCAT CATCGCGGCC
TCATCGTCGA GCACGCGCCG ACGCCGCGAG CTTGTGACGC GGCTGGGCCG GTTCCCGGTG
AAAATCCGCG TCCTTCCCTC CATCGCCGAC GTGGCCGCGG GGAAATATCT CGTAAGTTAT
GTCCGCGACA TCGATATCGA CGACCTTCTG GGCCGCTCAC CGGTGCCCGC CGATCCCGAA
TTGATGCGGT CGAGCATCGA TGAGCGCATC ATAATGGTGA CTGGTGCTGC GGGATCGATC
GGCTCAGAGG TGTGCCGCAC AATCGCACGC GGGAAGCCGA CGAAACTCGT GCTTTTCGAG
ATGAACGAGC CCGGCCTTTA TCAGATCGAG CGGGAGCTGC GGCGATACGG CGCTTTTCCG
ATCGTGCCCG TGCTCGGTTC GGTCTGCGAT GCGCACCTCG TCCGGCAGAC GCTGGCCGAA
CACGGAGTAC AGACCGTCTA CCACTGCGCT GCCTACAAGC ACGTGCCTCT CGTCGAATGC
AATCCACTCG AGGGCGTGCG CAACAACGTA TTCGGCACCT TGACCCTTGT GGAAGAAGCC
TGCGCGGCCG ATGTGCGAAA CTTCATTCTC ATCTCCTCGG ACAAGGCGGT GCGGCCCACA
AGCGTAATGG GCGCCACCAA GCGCCGGGCG GAGCTGATCG TGCGCTATGT CGGCGAGGAG
GCCTGCAAGA AGGAGAAGAA CCGCGTCTTC TCTTCCGTGC GTTTCGGAAA TGTCATCGGG
TCCAGTGGCT CCGTCGTACC GCTCTTCAAA GAGCAGATCG CAGCGGGAGG ACCAGTCACG
CTCACGCATG ACGACATGAC ACGTTATTTC ATGTCGGTGC GCGAGGCTGC GGGGCTGATC
GTGCAGGCGG GCGCGCTTTC GCGCAGCGGC GATATTCTCC TCCTCGATAT GGGAGAGCCG
ATCAGGATCC GCCAGCTTGC CGAGGATATG ATCATGCTCG CCGGCTTCAC CGTTCGAAAC
GAAGACAATC CCGATGGAGA CATCGAGATC GTCACGATCG GGATGCGTGA CGGGGAGAAG
CTTTACGAGG AGCTTTTCTA CGATCCCGCC GGCGTGACCA CGACCCGCCA CCCCAAGATC
CTGCGGGCCG GCCAGCTTGG AACAACCGAA CAGATACCGG CAATGATCGC ACAGCTTAAA
CTCGCCGTCG AACATGGCGA TGTGACCGCG GTGCGTCAGG TTCTCTTTGG GCTTATCGGC
GAAAATGGCC GGCTGGCGCC TGTTCCGAAA CTGCCGCCCG TGCCTACGGA TGAAAACTTA
CGGCGCAGGG CGTGA
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| Protein sequence | MRLRSLVEWL HMRSRRTKRA MLLSADVVGL MAIIWLAFCF RFNQFFIPNL EQTLLILAAP
VIAIPIFIRM GLYRAVLRYL QEQAIWTMIR AVTFSSLAWV GLAFITLSYG ADGVPRTIAV
LYWAGSLVSV VGSRLGIKWL LNGRISHAAH KKRVLVYGAG DAAMQLAEAL SASGDRQVVG
IVSDDSGLHG MEIVGIRVYP AEQLEDLVLD TEAQEVIIAA SSSSTRRRRE LVTRLGRFPV
KIRVLPSIAD VAAGKYLVSY VRDIDIDDLL GRSPVPADPE LMRSSIDERI IMVTGAAGSI
GSEVCRTIAR GKPTKLVLFE MNEPGLYQIE RELRRYGAFP IVPVLGSVCD AHLVRQTLAE
HGVQTVYHCA AYKHVPLVEC NPLEGVRNNV FGTLTLVEEA CAADVRNFIL ISSDKAVRPT
SVMGATKRRA ELIVRYVGEE ACKKEKNRVF SSVRFGNVIG SSGSVVPLFK EQIAAGGPVT
LTHDDMTRYF MSVREAAGLI VQAGALSRSG DILLLDMGEP IRIRQLAEDM IMLAGFTVRN
EDNPDGDIEI VTIGMRDGEK LYEELFYDPA GVTTTRHPKI LRAGQLGTTE QIPAMIAQLK
LAVEHGDVTA VRQVLFGLIG ENGRLAPVPK LPPVPTDENL RRRA
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