| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0757 |
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| Symbol | |
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| ID | 4181135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 829993 |
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| End bp | 832842 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638066636 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_673322 |
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| Protein GI | 110633114 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.634216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCTAT GGCTGGTGCT GGTTTTTGTT GCAGCTCCTG CATTCGCCGT CGAACCCATC
AAGATCTCGC GCGAGGACGT CGCTCTCGAC TTGTCGCAGG CGGTCGAGAT CCACCGCGAC
CAGGGCGAGA ATTTCCAGGT CTCCACAGCA CCCGGCGCGG ACGGTATCGT CAGGCGGATC
GAGGTCGAGG CTCAGGATAG CCGTTCGACA GGCGACTGGG CCGTTTTCGC GCTTGCCAAC
ACCACCGACG AGCAGCTCGA CAGGCTCATC GTAGCGCCGC ATTTCCGGCT GGTCGGTTCC
GGTATTATCT GGCCGGACCT GGGGTCGCAG CGCATCGCCG CCATCACGCC TTCGGAGGGT
TTTGCCCTCG ACCGTCAGCC AAGCAGCGAT GCGGATGAAT TCCTGGTTAC CTTGAACCCA
GGCACGGTGG TCACTTTCGT GGCGGAGCTC TCGTCCCCCA ACCTGCCGCA GATCTATCTA
TGGGACCCGG CGGCCTACAA GGATACGGTG AACTCCTACA CGCTGTTCCG GGGCATCGTG
ATCGGGATCG CCGGTCTGCT GGCGCTGTTC CTCACCGTAC TTTTCGTCGT CAAGGGAACA
TCGATGTTTC CCGCCACGGC CGCGCTCGCC TGGGCGATCC TTGCCTATAT CTCGATCGAC
TTCGGCTTCC TGTCACGCAT CATCGATATA TCGCCCGGCA ACGAGCAGCT CTGGCGGGCG
GGCACCGAGG TGGCGCTCGC AGCGACTTTC GTGGTTTTCC TCTTTGCGTA TCTGAACCTC
GCCCGCTGGC ACAACCACTT CAGCTACGGA ACACTGGCCT GGATACTCGT CCTCGTCATC
ATCGCCGGCG TTGCGGTTTT CGACCCGCCG ATTGCGGCGG GGATCGCGCG CTTCTCTCTC
GCCGCCACCG CCGTCATCGG CCTTGGCCTC ATCGTTTATA TGGGAATGCA GGGCTATGAC
CGGGCGATCA TGCTCGTCCC CAGCTGGCTA ATGGTTCTGG TGTGGCTCAC CGGGGCATGG
ATGGCGGTGA CGGGAACGCT GAACAACGAC ATCCTGCAGC CGGCCATCAG CGGCGGTCTC
ATCCTGATCG TGCTTCTGAT CGGCTTCACC GTCATGCAGC ACGCTCTTTC CGGCAGCGCG
ATTTTCCAGG GCCTTTTCAG CGACATGGAA AGGCAGGCGC TGGCCATCAG CGGTTCCGGC
GACGTTGTCT GGGACTGGGA CGTGCTGCGC GACCGCGTGA CCACCAAGCC CGATATCAGC
AAACAGCTCG GCCTTGCGGC AAACACGCTG CACGGACCCG CACGAAGCTG GCTGCCGCTG
CTTCACTCGG ACGACCGGGA TACTTTCCGC ACGACGCTGG ACATGGTGCT GGAGCACCGG
CGCGGGCGTA TTGCGCAGAA TTTCCGGCTA CGCGGCGCGG ACGGACACTA TCACTGGCTG
TCCCTGCGGG CTCGCCCCGT GGTGGGCTCG GACGGCGAGG TGATCCGCTG CGTGGGCACT
ATGGTCGATG TCACCGAACA GAAGAAGGCA GAGGAGCGCC TGCTGCACGA TGCCGTGCAC
GACAATCTCA CCGGCCTGCC CAACCGCGAG CTCTTCCTGA ACCGGCTCGA TGCCACCATT
GCGATGGCCG GCAAGGAAAG GAAGATCCGT CCGACCGTGC TCGTCATCGA CATCGACCGG
TTCAAGCACG TCAATGACGA ACTCGGCATC TCCGCAGGCG ACACCATCCT GCTGACGATT
GCGCGGCGTC TGCACCGGCT TTTAAAACCC GGCGACGCGC TCTCGCGCGT GGCGGGCGAC
CAATTTGCGG TCATGCTTCT TTCCGAGCAG GAACCGGCAC AAATCGCCGC CATCGCGGAT
GCCGTGCGGC TGGCCATAAG GTCCCCTATC ACCTTCGCCA AGCGCGAAAT CATCCTCACC
GCCTCCATCG GCCTGGTTTC CTGGACCGCG GTTCAGGCTT CGGCGGAAGA AATGATCAAG
GATGCGGAAT TGGCCATGTA CCAGGCCAAG CGTTTCGGAG GCGACAGGAT CGAGCCGTTC
CGTCCGGCCT TCCGTTCCAT CGGCACAGAC CGGCTGCAGA TGGAATCTGA CCTGCGCCGG
GCCGTGGACC GCAAGGAATT GAGGGTGGCC TATCAGCCGA TCGTGCGGCT TGAAGACGGC
ACCGTCGCGG GCTTCGAAGC CCTGCTGCGC TGGGACCATC CGCGACGCGG GACGATTCCG
CCGGCGGACT TCATCCCCAT CGCCGAAAGC TCTGGCCTGA TTGTCCAGCT TGGCCTGTTT
GCGATGCAGC AGGCGGCGGA AGACCTTTAT TCATGGCAGA AGCAGCTTGG GGACGTCCCG
CTCTTTATGT CGGTCAACTT GTCCAGCCGT CAGTTCATCC GCCGCGACCT GGTGGGCGAC
GTGCGCTCCA TCGTGGCGCG TGCGAACATC AAGCCGCGCT GCTTCCGGCT GGAGCTTACC
GAATCCGTCG TCATGGATAA TCCCGAGCAA TCGTCCCACG TGCTGGCCAA ACTGAAACAG
CTCGGGATCG GCCTCTCCCT CGACGATTTC GGCACGGGCT ATTCCTCCCT CTCCTATCTC
ACGCGCTTCC CCTTCGATAC GATCAAGATC GACAAGACCT TTCTGAACAA TCCGAGCTCG
AAGGGAAACG TGCTGCTCAA ATCCATGATC ACCATGGCCC ATGACCTTGG ACTTTCCGTG
GTGGCCGAGG GCGTAACCGA CGAGCATGAC CTCTCTCAGT TGCGCCAGAT GGGCTGCGAA
TACGGACAGA GCTTCTATCT CGGGGCGCCC TCCGATGCAG AGTCCTGCCT GAAGCTCCTG
ACGGAGCAAA ATCCCGTCAC CGCGAGCTGA
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| Protein sequence | MLLWLVLVFV AAPAFAVEPI KISREDVALD LSQAVEIHRD QGENFQVSTA PGADGIVRRI
EVEAQDSRST GDWAVFALAN TTDEQLDRLI VAPHFRLVGS GIIWPDLGSQ RIAAITPSEG
FALDRQPSSD ADEFLVTLNP GTVVTFVAEL SSPNLPQIYL WDPAAYKDTV NSYTLFRGIV
IGIAGLLALF LTVLFVVKGT SMFPATAALA WAILAYISID FGFLSRIIDI SPGNEQLWRA
GTEVALAATF VVFLFAYLNL ARWHNHFSYG TLAWILVLVI IAGVAVFDPP IAAGIARFSL
AATAVIGLGL IVYMGMQGYD RAIMLVPSWL MVLVWLTGAW MAVTGTLNND ILQPAISGGL
ILIVLLIGFT VMQHALSGSA IFQGLFSDME RQALAISGSG DVVWDWDVLR DRVTTKPDIS
KQLGLAANTL HGPARSWLPL LHSDDRDTFR TTLDMVLEHR RGRIAQNFRL RGADGHYHWL
SLRARPVVGS DGEVIRCVGT MVDVTEQKKA EERLLHDAVH DNLTGLPNRE LFLNRLDATI
AMAGKERKIR PTVLVIDIDR FKHVNDELGI SAGDTILLTI ARRLHRLLKP GDALSRVAGD
QFAVMLLSEQ EPAQIAAIAD AVRLAIRSPI TFAKREIILT ASIGLVSWTA VQASAEEMIK
DAELAMYQAK RFGGDRIEPF RPAFRSIGTD RLQMESDLRR AVDRKELRVA YQPIVRLEDG
TVAGFEALLR WDHPRRGTIP PADFIPIAES SGLIVQLGLF AMQQAAEDLY SWQKQLGDVP
LFMSVNLSSR QFIRRDLVGD VRSIVARANI KPRCFRLELT ESVVMDNPEQ SSHVLAKLKQ
LGIGLSLDDF GTGYSSLSYL TRFPFDTIKI DKTFLNNPSS KGNVLLKSMI TMAHDLGLSV
VAEGVTDEHD LSQLRQMGCE YGQSFYLGAP SDAESCLKLL TEQNPVTAS
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