Gene Meso_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0736 
Symbol 
ID4180214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp810823 
End bp811581 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID638066615 
Producthemolysin A 
Protein accessionYP_673301 
Protein GI110633093 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCC AAGCCGTCCA TGCCCGCCTT CGCCTAGACC AGCTTCTGGT GGAGCGCGGC 
TTTTTTGAAA GCCGTGCGCG CGCCCGCGAT GCCGTACTGC GCGGTACGGT TCAGGTGGCA
GGGCAGACAG TGAAAAAGCC TGGCCAGCTT TTCCCGGCCG ATGCGCAGAT CACGGTCGAG
GACCCGGCCC GCCGCTATGT CTCGCGGGCG GCGCTGAAGC TCGTCCATGG GCTGGATGCG
TTCGGCCTCG ATCCCCACGG CGCCCTTGCG CTCGACATCG GCTCCTCGAC CGGCGGCTTC
ACGCAGGTGC TTCTGGAGCG CGGTGCCGCC CATGTGACGG CGATCGACGT GGGCACCGGC
CAGATGGACG CGAGGCTGCG AGAGGATCCG CGAGTCGCCT GCCTCGAAGG CATCAATGCC
CGCTACCTAA CACTCGGGAT GATCGGCGGC CGCAGGCCGA ATTTCCTCGT CTCCGATGTC
AGCTTCATCT CGCTGAAACT CGCACTGCCG CCCGCGCTCG AAATGGCGGA GAAGGGCGCT
TGGGGCCTTT TCCTCGTTAA GCCGCAATTC GAGGCGGGGC GCGAGGCGAT CGGAAAGGGT
GGCTTGTTGC GCGAGCCTGA TAAGGCTGAA GAGATTGCCC GCAATATCGC GGAATGGCTC
AGCATGAATG AAGGGTGGCG GGTGATTGGC CTTGAGCCAT CGCCTATCGA AGGCGGCGAC
GGCGCACGCG AATTCCTGCT GGCGGGGCGG AAAGAATGA
 
Protein sequence
MTAQAVHARL RLDQLLVERG FFESRARARD AVLRGTVQVA GQTVKKPGQL FPADAQITVE 
DPARRYVSRA ALKLVHGLDA FGLDPHGALA LDIGSSTGGF TQVLLERGAA HVTAIDVGTG
QMDARLREDP RVACLEGINA RYLTLGMIGG RRPNFLVSDV SFISLKLALP PALEMAEKGA
WGLFLVKPQF EAGREAIGKG GLLREPDKAE EIARNIAEWL SMNEGWRVIG LEPSPIEGGD
GAREFLLAGR KE