| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0734 |
|---|
| Symbol | |
|---|
| ID | 4180212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 807737 |
|---|
| End bp | 808657 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638066613 |
|---|
| Product | Pirin-like |
|---|
| Protein accession | YP_673299 |
|---|
| Protein GI | 110633091 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCT TTCCCGGCAG GGATCCCGAA GCGGGCGATG CCTTTGCTTG CGACGCGATC
GAGACCCTCA TCGTTCCGCG CTCGGCCGAT GTCGGCGAGT TTCAGGTGCG CCGTGCCTTG
CCATCGGCCC GGCGGCGGCT GGTCGGGCCG TTCATCTTCT TCGATCGCAT GGGGCCGGCC
GTCCTGCGGC CTGGCCAGGC CGTGGATGTG AGGCCGCATC CGCATATCGG GCTTGCCACC
GTCACCTATC TTTTCGACGG CTTCATCCGG CACCGCGACT CACTTGGAAC GGAAATGGTC
ATCGAGCCGG GCGACCTGAA CCTGATGACC GCGGGTCGAG GCATCGTCCA TTCGGAGCGC
AGCCCTGAAG AGATGCGCGG CGGTCCGCTG TCGATATCGG GCTTGCAGAC ATGGCTGGCG
CTGCCGGATG GCGGCGAGGA GGTGGAGCCC GATTTTTCGC ATGTCCTGCG GGGGGATCTT
CCCCTGCTGG ATGCGCAGGG TGTCTCCGGC CGTCTGATTA TTGGCGCGCT TCATGGACTT
CGCTCGCCGG TCAAGACCGC CGCGGAAACG CTCTATGCCG ATATCAGGCT CGCGCCCGGC
GCCGCCTTTC AAATTCCTGC GGATACCGAG GAACGCGCCA TTTATGTTCT GGAAGGAACG
GTCGAGATTT CGGGCGACAA GTTTCCCTCC GATCGGCTGT TGGTCTTCCG CCCCGGCGAT
GAAATTGTAG TGAGGGCGGA AACGGGAGCA CATTTTATGC TGGTGGGTGG TGCGGCACTC
GGCTCGCGGC GCTATATCTG GTGGAATTTC GTTTCTTCCT CTAAGGAACG CATTGAACAG
GCGAAGGAGG AATGGCGCAC GGGCCGCTTC GACACCGTTC CCGGTGACGA AGAGGAGTTC
ACCCCCTTGC CGGAGAAGTA A
|
|---|
| Protein sequence | MSFFPGRDPE AGDAFACDAI ETLIVPRSAD VGEFQVRRAL PSARRRLVGP FIFFDRMGPA
VLRPGQAVDV RPHPHIGLAT VTYLFDGFIR HRDSLGTEMV IEPGDLNLMT AGRGIVHSER
SPEEMRGGPL SISGLQTWLA LPDGGEEVEP DFSHVLRGDL PLLDAQGVSG RLIIGALHGL
RSPVKTAAET LYADIRLAPG AAFQIPADTE ERAIYVLEGT VEISGDKFPS DRLLVFRPGD
EIVVRAETGA HFMLVGGAAL GSRRYIWWNF VSSSKERIEQ AKEEWRTGRF DTVPGDEEEF
TPLPEK
|
|---|
| |