Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0732 |
Symbol | |
ID | 4180210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 806461 |
End bp | 807387 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638066611 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_673297 |
Protein GI | 110633089 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACTA GATTATACAC CCACCCCATT TTTCTGGAGC ACTTGGTGCC GCCCGGCCAT CCGGAGCGGC CGGATCGGCT GCGCGCGATT GAAAAAGTCC TCGCTCACGA TGTCTTCAAT CCGCTCGACC GCGTGTCGGC GCCCATGGCG GATTCGTCGG CCGCCCTTCT CGCGCATATG GACGCTTATA TCCGCCGCAT GGAGCGTGAG ATTCCGGCCG AGGGCATGGT CCGCATCGAT GTGGACACGG TGGTGAGTCC GATTAGCTGG GATGCGGCGC TTACGGCCGT TGGCGGGGCC CTTGCTGCGG TCGATGACGT CTTTACCGGC CGCGCGGACA ACGCCTTCGT CGCCGCTCGC CCGCCTGGCC ATCACGCGGA GAGGAACAGG GCGATGGGCT TCTGCCTGTT CAACAATGCG GCGATTGCGG CCCGCCACGC TCAGAAGGCG CACGGAGCCG AGCGTGTCGC CATCGTGGAT TGGGATGTGC ACCATGGCAA CGGCACTCAG GACATATTCT GGGACGATCC TTCGGTTCTT TATTGCTCCA CGCATCAGAT GCCGCTCTAT CCCGGTACGG GAACTGAATC CGAAACGGGA GCAGGCAACA TCGTCAACGT TCCGCTCGCA CCGGGCGCGG ACGGTGGGGA TTTTCGGGAA GCGCTGGAGG CGGTGATCCT TCCCCGCATC AACGAATTTC AGCCGGACCT CATCATCATT TCGGCGGGTT TCGATGCCCA TTACCGCGAT CCGCTGGCCC AGCTCAATTT CGACGAGCGG GATTTCGGCT GGGCAACCGC CATGCTGATG GAGCGCGCCG GGCGCTGGTC GTCCAACCGG CTTGTCAGCC TGCTGGAAGG CGGCTACGAC CTGGAAGGGC TGGGCCTATC GGTAGCCGCT CATGTGGGAC GCTTGATGAA AGGGTAA
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Protein sequence | MPTRLYTHPI FLEHLVPPGH PERPDRLRAI EKVLAHDVFN PLDRVSAPMA DSSAALLAHM DAYIRRMERE IPAEGMVRID VDTVVSPISW DAALTAVGGA LAAVDDVFTG RADNAFVAAR PPGHHAERNR AMGFCLFNNA AIAARHAQKA HGAERVAIVD WDVHHGNGTQ DIFWDDPSVL YCSTHQMPLY PGTGTESETG AGNIVNVPLA PGADGGDFRE ALEAVILPRI NEFQPDLIII SAGFDAHYRD PLAQLNFDER DFGWATAMLM ERAGRWSSNR LVSLLEGGYD LEGLGLSVAA HVGRLMKG
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