Gene Meso_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0620 
Symbol 
ID4182403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp696951 
End bp699128 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content61% 
IMG OID638066499 
Productsignal transduction histidine kinase 
Protein accessionYP_673185 
Protein GI110632977 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAACG TAGAAGAATT TCCAGTCACA GCACGCCGCC TCAGCGAGTA TGAGGCGCTA 
GTGGCGGCAG GGTCCAGCGC GCTGGAGGCC ATTCCCGGCG CAGTCTATCT TTGCGACCAC
GAAGGCTGGC TCGTTCGGTA CAATACGGAG GCTGCTGAAC TCTGGGGGCA GTCCCCGCCG
GAAAATAATG TGCGTTTCTG CGGTTCGCAT CGTCTCTTCC TCCCGGACGG CACACCCCTG
GCACATGAAG ATTGCCCGAT GGCAACGGCA GTTTTTACGG GTGAGGCCAC GCGCAATGCC
GAAGTCGTGA TCGAAAGGCC GAATGGGTCG CGCATCATCG CGTTGGTGAA TATCCGCGCT
CTCAGGGATC ACAGCGGGAA AATCCAGGGG GCGATCAACT GCTTTCAGGA CATCTCGCGC
CATAAGGCCA TGGAAGAAGA GGTTCGCCGC AAGAATGACG AACTTGAGGA CTTCTTCGAG
AATGGTGCGA TCGGCCTTCA CATCGTGAAT GGTGAAGGAA CCATCCAGCG CGCAAACAAG
GCCGAGCTTG CCCTCCTTGG CTACACCGCC GAGGAATATG TCGGCCGGCA CATAGCGGAA
TTTCACGCGG ATGCCCCCGT TATCGGCGAT ATCCTCCAAA AGCTGTCTTG CGGGGAGAGG
CTGGACCGGT ATCCCGCGCG CCTTCGCGCG AAGGATGGCA CGATTAAGCA TGTGCTGATC
ACATCCAACA GCCGCTTCCA GGACGGAAAG TTCGCCAACA CGCGCTGCTT CACGACCGAT
GTTACTGGTC TCTACGAGGC CGAACTGGCG CGTCGCGAGA GCGAAGAGCG CCTGGCGGCG
ACCTATGAGG CCGCCACAAT CGGCATTGCC GAAACCGACG CGGAAGGGCG CATGCTCCGT
GTGAACGACG CCGCCTGCAA GATGTTGGGA CGTACCCGCG AAGAGCTCCT GGAAATGACC
TTCTTCGACT ACACGCACGA AGAGGACCGC GAGAAGGACT CCGCCCTTTA TGTGAGTCAG
ATCCGTGGGG AGCGTGACAA CTACACGCTG CGCAAGCGGG CAAACCGGCC TGACGGCACA
ACGGTCTACC TCGACGTCCA CAGCTCGTCG GTGCGAGATG GTAGGGGCAA CTTCCGCTAT
GGCGTACGGG TGATACAGGA CGTCACCGAG GCGAAGTGGA TGGAGGATCG GCTCCGCGAG
AGCGAACGGC ACATGCGGGA CCTGCTCGAA GCGCTACCGG CCGCCGTCTA CACCACCGAT
GCGGCTGGCC ATATTACTTT TTACAACAAG GCTGCCGTTG AAATGGCCGG CCGGACACCC
CAGGCCGGGG ATTTGTGGTG CGTTACCTGG CGTCTTTACA ATCCGGATGG TACGCCCCTG
CCGCACGATG ACTGCCCGAT GGCGGTCGCA CTGAGGGAGA ACCGCCCCGT TCGTGGCGTA
GAAGCGATAG CCGAGCGGCC CGACGGCACG CGTGTTCCCT TCATTCCGTA TCCGACGCCG
CTCCATGACG TTGATGGGAA GCTCGTCGGC GCCATCAACA TGCTCGTGGA CATAAGCGAG
CGCAAAAAGG CGGAAAACAG GCAGAAGGTG CTCATCGACG AGCTCAACCA CCGTGTCAAG
AATACGCTTG CAACGGTGCA GTCGCTGGCC TCCCAAACAG CACGCCATTG CGAAGATCTG
GGGGATTTCC GAGGCCGCTT CGAAGAAAGG CTTCTTGCAC TTGCGCACGC GCATGACCTG
CTCACCAAAC GGCACTGGGA GAATGCCCCC CTGGAGTCGC TGGCCCATGA GGTGTTGACG
CCTCTTGCGG GCGAAGCGTC CGACAGGATC CTGATCGAAG GGCCTGCCGT TGATGTCAGT
CCGCGGGCAG CGCTAAGCCT CACGATGGCG CTCAACGAGC TCGTCACCAA CGCCGTCAAG
TATGGCGCGC TTTCCTCGGA TACGGGAACG CTTTCGGTCG TCTGGCGCCT GCAGCGGGCG
GCAAAACAAA CGATGCTGGC GCTCGATTGG CGCGAGCAGG GAGGGCCGCC GGTAATTCCG
CCGACGAAGC GAGGCTTCGG CACCCGTCTG ATGGAGCGCT GTATCGAACG CGATCTTGGC
GGAGAGTTCT CCCTCGTCTT CGATCCCGGC GGAGTATCGT GCAGCATCTC GATCCCAATC
GAGTCGATCA AGGCATGA
 
Protein sequence
MSNVEEFPVT ARRLSEYEAL VAAGSSALEA IPGAVYLCDH EGWLVRYNTE AAELWGQSPP 
ENNVRFCGSH RLFLPDGTPL AHEDCPMATA VFTGEATRNA EVVIERPNGS RIIALVNIRA
LRDHSGKIQG AINCFQDISR HKAMEEEVRR KNDELEDFFE NGAIGLHIVN GEGTIQRANK
AELALLGYTA EEYVGRHIAE FHADAPVIGD ILQKLSCGER LDRYPARLRA KDGTIKHVLI
TSNSRFQDGK FANTRCFTTD VTGLYEAELA RRESEERLAA TYEAATIGIA ETDAEGRMLR
VNDAACKMLG RTREELLEMT FFDYTHEEDR EKDSALYVSQ IRGERDNYTL RKRANRPDGT
TVYLDVHSSS VRDGRGNFRY GVRVIQDVTE AKWMEDRLRE SERHMRDLLE ALPAAVYTTD
AAGHITFYNK AAVEMAGRTP QAGDLWCVTW RLYNPDGTPL PHDDCPMAVA LRENRPVRGV
EAIAERPDGT RVPFIPYPTP LHDVDGKLVG AINMLVDISE RKKAENRQKV LIDELNHRVK
NTLATVQSLA SQTARHCEDL GDFRGRFEER LLALAHAHDL LTKRHWENAP LESLAHEVLT
PLAGEASDRI LIEGPAVDVS PRAALSLTMA LNELVTNAVK YGALSSDTGT LSVVWRLQRA
AKQTMLALDW REQGGPPVIP PTKRGFGTRL MERCIERDLG GEFSLVFDPG GVSCSISIPI
ESIKA