| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0619 |
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| Symbol | |
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| ID | 4182402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 694804 |
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| End bp | 696528 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638066498 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_673184 |
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| Protein GI | 110632976 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCCCT CCCTCGAAGC GCTTTACCAG GTACTTACTG CCATTCCCTA TCCGGTCTTC
GTGAAAGACG AGAACCACAG GTGGGTTCTC GTCAATCAGG CGTTCTGCGA GATAATGGGG
CATACGCGCG AGGAACTGCT CTACAAGACA GACTACGACT TCGTCCCCGC CGCACAAGCC
GACGTTTTCC GGGCCATCGA TGATCATGTA TTCGCCACTG GTGAGCCAAA CGAAAACGAG
GAGGTTCTAA CCGACGCATC AGGAACAGTG CGCGTGATCA CAACGCGCAA GTGCCGCGTC
GAACTCCCCA CGCCAGACGG TCCGCGACCG TTCATCGTCG CCATCTTCTC AGATATCACA
GCTTATCGGG AAGCCGAGGC CCGCGCGCGT TACCATGCCC ATCACGATTC GCTCACGGGT
CTTGCCAACC GCATGCATCT TGGCGAACGG CTGCAGGAAG AGCTTATCGA AGCCCGCGCG
AAGGGTACCC AACTGGCGTT ATTCCTGCTG GACCTGGACG GGTTCAAGCA AGTCAACGAC
CGGTATGGGC ATGCTGCGGG GGACGAACTG CTGCAAATCA TCGCCACTCG CCTGAAACGG
ATAGTGCGCG GGCGCGATGT GGTGGCCCGG CTCGGGGGCG ACGAATTTTG CGTGGTTCAG
GTGGAACCGG ATGATTCCAG CGCGGTCGAT GCACTTGCCG AGCGCATATT GGGAGTCTTG
TCCGAACCAA TTGTAGCAGA ATGGGGAACT GCACGTGTCA CCGCGTCCAT CGGCATCTCG
GCGTTTCCGG GAGATGCGGT GACGCAGGAG GACCTGCTTC GCTATGCCGA CATTGCTCTT
TACAGTGTGA AAGGATCGGG CCGTGCCTCC TACGCCCGAT ATGACAAGCA GAAGGACGGG
GTGTCCAATT CCATCGGCAG CCTGGCGCCC GCACTTGAAG CGGCAATTGC CAATGAGGAG
ATAACCCTCG CTTTCCAGCC TCTGGTTTCG ACCCTGGACG GCACCCCGCG GGCCTTCGAA
GCCTTGGCCC GCTGGCACCA CCCGGAACTC GGCGCGATAC CGCCTGGCGT CTTTATTCCT
CTTGCCGAGA GAAAGGGGTT GATGCCGGCC CTGGGCCGCC TTGTGCTGCG GCAGGCGTGT
GATGCGGCTG CAAAATGGGA CTCCGATCTC CAGGTGCGGG TCAACATTTC GCCGGTTCAG
GTGGAAAGCG GAGATCTGGT GGAGGTGATC AGGGATGTTC TCAAGGAAAC CCGGCTGCCT
GCTCAAAGGC TCGAGATCGA AGTTACTGAA GCCGTCTTAC TGAATGAGAA AAGCGAGAAC
CTGCACATCT TTCATCGACT GAAGATGCTG GGGATCAAAA TCGCGCTCGA CGATTTCGGT
TCCGGCTGGA CCTCCCTCGA CGTGCTGCGG CGCTTCCCGT TCGACCGGCT GAAAATCGAC
CGGAGCTTTG TCGCGAACAT GGAAACCGAT CCGCGCGCAG CCGCCGTCGT CAGAGCTGTT
CTCAGCATCG GCAAAGCGCT GGACCTGCCT ATCACGGCGG AAGGTGTCGA GCGGCGAGAG
CAGCTGGACG TCCTCAGGAC AATGGGGTGC GACGAAGTAC AGGGGCATTT CCTGGGCCGT
CCAAAGAACA TCCGTGGCAA TGGCCCTGTG GACGAGGCCG AAAAATGCGC CGAGACCAAG
GAGGAACTCC GTGAGGCCAA TGAAGCTGGC GCTGCTTTAG GGTGA
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| Protein sequence | MGPSLEALYQ VLTAIPYPVF VKDENHRWVL VNQAFCEIMG HTREELLYKT DYDFVPAAQA
DVFRAIDDHV FATGEPNENE EVLTDASGTV RVITTRKCRV ELPTPDGPRP FIVAIFSDIT
AYREAEARAR YHAHHDSLTG LANRMHLGER LQEELIEARA KGTQLALFLL DLDGFKQVND
RYGHAAGDEL LQIIATRLKR IVRGRDVVAR LGGDEFCVVQ VEPDDSSAVD ALAERILGVL
SEPIVAEWGT ARVTASIGIS AFPGDAVTQE DLLRYADIAL YSVKGSGRAS YARYDKQKDG
VSNSIGSLAP ALEAAIANEE ITLAFQPLVS TLDGTPRAFE ALARWHHPEL GAIPPGVFIP
LAERKGLMPA LGRLVLRQAC DAAAKWDSDL QVRVNISPVQ VESGDLVEVI RDVLKETRLP
AQRLEIEVTE AVLLNEKSEN LHIFHRLKML GIKIALDDFG SGWTSLDVLR RFPFDRLKID
RSFVANMETD PRAAAVVRAV LSIGKALDLP ITAEGVERRE QLDVLRTMGC DEVQGHFLGR
PKNIRGNGPV DEAEKCAETK EELREANEAG AALG
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