| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0617 |
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| Symbol | |
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| ID | 4182400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 691497 |
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| End bp | 692795 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638066496 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_673182 |
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| Protein GI | 110632974 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.290614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATGGC ATGCAGGCGT GAAGACCGGG TTCACCGGGC CATTTATCGC TGGACTGGTG
AGCCTGACCG CAGGACTGGG CGGCTTTGCC ACCTGGGCAG CGCTGGCGCC CCTGGAGGGA
GCCGTCATCG CACCTGGAAA GGTGGTCGTG CAGGGGCGCA ACAAGACCGT TCAGCATCTG
GAAGGCGGAA TCGTCAAGAC GATCCTCGTC GAGGACGGCG AGAATGTGGA GGCAGGCGAT
CCTCTCCTCG TGCTCGATGG CACCGCCGCG AAATCGGCGG CGGACCGGCT GCGCGCCCAA
TTGGCCGCTA TCGAGGCCAC GGAGGCCAGA GCCCTCGCCG AGCGGGAGAG CGCCAAGTCC
ATATCTTTCC CGGCCCATCT ACTCGCTTCT CAGAAACCGG AGATCGTGCG CCTTCTGGCG
GACCAGGAGG CCGAATTTGA CTTCCGGCTG CGCGAGCACG GAGCCGAAAT CGCGACGTTC
GAACTGCAGA TCGCCGCGCT GGAGGCTCAG ATCGCCGGCC ATACGGTTCA GCAGGAAGAA
ACGGCGCGGC AGCTTGAATT GCTGGTCGAG GAACGGCAGG CATTGGAAAC CCTGCTTGCC
AAAGGGCTGA CCCGCAAGAG CCAAGTTCTG GCGCTGAAGC GCAACGAAGC CGAACTTCAT
GGCCGCCAGG GCCAGCTTGC CGCGGCGATT GCGGAATCGC GCCGCACCAT GGCGGAAATC
CGTGAGCGCA TTGAACAGGT CCGCTCGGCT CGCACCAGCA AGGCCTCGGC CCAGCTCAGC
GAGCTTCGGC TAAAACGCGC GGAAGTGCTG GAGCAGCTGC GCGCGGCAGA GGACGTCAGC
GGCAGGCTCG TCGTGCGCGC GCCGGCTTCG GGAACCGTCA TCAACCTGGC CAAGTACAAT
CCGGGCGCCG TTATCGCTCC GGGCGAAGAT CTGATGTCCA TCGTGCCGGA AGAAAGCGGT
CTGGTCGTGG AGGCGCGGAT CAGGCCGCTC GATATAGACG AGATCAGGGT TGGCCAGGAA
GCACGCCTCA ATTTCTCGGC TTTCGATGCA CGGCAAACGC CGCCGATCGA AACCAAGGTG
GTCTATCTTT CGGCAGACCG GTTCGAGAGC GAGCGCGGCG AACCTTACTA TATCGCCCGG
CTCGAAATCC CGGCCGGCTC CGGCGCTGGT TTTGACCCGT CGAAAATCGG ACCCGGGCAG
GAGGCTGAGG TCTTCATCAC CACGGGTGAG CGAACCTTCT TCGGCTATAT CGCCGCCCCT
CTCATGAAAA CACTCTCCCG GTCCGTCCGG GAGAGCTGA
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| Protein sequence | MEWHAGVKTG FTGPFIAGLV SLTAGLGGFA TWAALAPLEG AVIAPGKVVV QGRNKTVQHL
EGGIVKTILV EDGENVEAGD PLLVLDGTAA KSAADRLRAQ LAAIEATEAR ALAERESAKS
ISFPAHLLAS QKPEIVRLLA DQEAEFDFRL REHGAEIATF ELQIAALEAQ IAGHTVQQEE
TARQLELLVE ERQALETLLA KGLTRKSQVL ALKRNEAELH GRQGQLAAAI AESRRTMAEI
RERIEQVRSA RTSKASAQLS ELRLKRAEVL EQLRAAEDVS GRLVVRAPAS GTVINLAKYN
PGAVIAPGED LMSIVPEESG LVVEARIRPL DIDEIRVGQE ARLNFSAFDA RQTPPIETKV
VYLSADRFES ERGEPYYIAR LEIPAGSGAG FDPSKIGPGQ EAEVFITTGE RTFFGYIAAP
LMKTLSRSVR ES
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