Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0604 |
Symbol | |
ID | 4179349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 679030 |
End bp | 680460 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638066483 |
Product | type II secretion system protein E |
Protein accession | YP_673169 |
Protein GI | 110632961 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGGCA GAAAATCCGC CTCCCAGGTG CAGGCCATCG AACAGCCCGC CGTTCAAGCG CCGATCACGC GCCGCGCACC TGAACCCGCA AACCAGTCAG AAAAGCTTCC CGCGACGGCT CCGGCCGCTT CTTTCGCCGA GAAGCCCAGC AGCTATTACG AGCTGAAGAA GGAAGTCTTC AGCGCACTCA TTGCCGCAAT CGATGTCGCC GCGCTCTCAG TCATGGAGCA GTCGCAGGCG CGCAAGGAAA TCGGCGCCAT CATCAACGAT ATCGTTGCCG CCAAAAGGGC CGGCATCTCG CAAGCCGAGC AGAATGACCT GCTTCGCGAC ATCTGCGACG ACATTCTTGG ATACGGTCCG CTGGAGCCGC TGCTTGCGCG CGATGACATC GCCGACATCA TGGTCAATGG CGCCAACCAG GTCTTTATCG AGGTCGGCGG TCAGGTTCAG GAAAGCGGCA TCCGCTTCCG CGACAACGAG CAGCTTCTGA ACATCTGCCA GCGCATCGTG AGCCAGGTCG GCCGCCGCGT CGATGAATCC AGCCCGATCT GCGACGCGCG TCTGGCGGAC GGCTCGCGTG TCAACGTCAT TGCGCCGCCG CTCGCCATCG ATGGCCCGGC CCTGACGATC CGCAAGTTCA GGAAAGACAA GCTCACACTC GATCAGCTCG TCACGTTCGG ATCCATTACG CCGGAAGGCG CGGAACTTTT GAAGATTATC GGCCGCGTGC GCTGCAATGT GCTGATCTCC GGCGGAACAG GCTCCGGCAA GACGACGCTT CTGAACTGCC TGACCGGCTA CATCGATGAC GGCGAGCGCA TCGTCACCTG CGAAGACGCC GCCGAGCTTC AGCTTCAGCA GCCGCATGTG GTGCGCCTGG AAACCCGCCC GCCCAACATC GAGGGCCAGG GCGAGATCAC AATGCGCAAC CTGGTGAAGA ACTGCCTGCG CATGCGCCCC GAACGCATCA TCGTCGGCGA GGTCCGCGGA CCCGAAGCCT TCGACCTCCT GCAAGCCATG AACACCGGCC ATGACGGCTC GATGGGAACC CTGCACGCCA ACTCGCCGCG CGAGGCTATC TCGCGCCTGG AATCCATGAT CACCACAGGC GGCTTCACGC TGCCCTCCAA GACGATCCGG GAGATGATCG TTTCTTCAGT GGACGTCATC GTTCAGGCCG CGCGTCTGCG CGACGGATCG CGGCGCATAA CCCACATCAC CGAAGTGCTG GGAATGGAAG GCGATGTCGT CATCACCCAG GACCTCTTCG TCTATGACAT CCTCGGCGAG GATGCCAATG GCAGGCTGAT CGGGCGGCAT CGCTCGACCG GCATCGGCCG TCCGGCCTTC TGGGACCGCG CGCGCTACTA CGGCGAAGAG GCCCGCCTGG CGGCAGCGCT GGACGCCGCG GAAGCGAAGG CCGCGGCCTG A
|
Protein sequence | MIGRKSASQV QAIEQPAVQA PITRRAPEPA NQSEKLPATA PAASFAEKPS SYYELKKEVF SALIAAIDVA ALSVMEQSQA RKEIGAIIND IVAAKRAGIS QAEQNDLLRD ICDDILGYGP LEPLLARDDI ADIMVNGANQ VFIEVGGQVQ ESGIRFRDNE QLLNICQRIV SQVGRRVDES SPICDARLAD GSRVNVIAPP LAIDGPALTI RKFRKDKLTL DQLVTFGSIT PEGAELLKII GRVRCNVLIS GGTGSGKTTL LNCLTGYIDD GERIVTCEDA AELQLQQPHV VRLETRPPNI EGQGEITMRN LVKNCLRMRP ERIIVGEVRG PEAFDLLQAM NTGHDGSMGT LHANSPREAI SRLESMITTG GFTLPSKTIR EMIVSSVDVI VQAARLRDGS RRITHITEVL GMEGDVVITQ DLFVYDILGE DANGRLIGRH RSTGIGRPAF WDRARYYGEE ARLAAALDAA EAKAAA
|
| |