Gene Meso_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0604 
Symbol 
ID4179349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp679030 
End bp680460 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content63% 
IMG OID638066483 
Producttype II secretion system protein E 
Protein accessionYP_673169 
Protein GI110632961 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGCA GAAAATCCGC CTCCCAGGTG CAGGCCATCG AACAGCCCGC CGTTCAAGCG 
CCGATCACGC GCCGCGCACC TGAACCCGCA AACCAGTCAG AAAAGCTTCC CGCGACGGCT
CCGGCCGCTT CTTTCGCCGA GAAGCCCAGC AGCTATTACG AGCTGAAGAA GGAAGTCTTC
AGCGCACTCA TTGCCGCAAT CGATGTCGCC GCGCTCTCAG TCATGGAGCA GTCGCAGGCG
CGCAAGGAAA TCGGCGCCAT CATCAACGAT ATCGTTGCCG CCAAAAGGGC CGGCATCTCG
CAAGCCGAGC AGAATGACCT GCTTCGCGAC ATCTGCGACG ACATTCTTGG ATACGGTCCG
CTGGAGCCGC TGCTTGCGCG CGATGACATC GCCGACATCA TGGTCAATGG CGCCAACCAG
GTCTTTATCG AGGTCGGCGG TCAGGTTCAG GAAAGCGGCA TCCGCTTCCG CGACAACGAG
CAGCTTCTGA ACATCTGCCA GCGCATCGTG AGCCAGGTCG GCCGCCGCGT CGATGAATCC
AGCCCGATCT GCGACGCGCG TCTGGCGGAC GGCTCGCGTG TCAACGTCAT TGCGCCGCCG
CTCGCCATCG ATGGCCCGGC CCTGACGATC CGCAAGTTCA GGAAAGACAA GCTCACACTC
GATCAGCTCG TCACGTTCGG ATCCATTACG CCGGAAGGCG CGGAACTTTT GAAGATTATC
GGCCGCGTGC GCTGCAATGT GCTGATCTCC GGCGGAACAG GCTCCGGCAA GACGACGCTT
CTGAACTGCC TGACCGGCTA CATCGATGAC GGCGAGCGCA TCGTCACCTG CGAAGACGCC
GCCGAGCTTC AGCTTCAGCA GCCGCATGTG GTGCGCCTGG AAACCCGCCC GCCCAACATC
GAGGGCCAGG GCGAGATCAC AATGCGCAAC CTGGTGAAGA ACTGCCTGCG CATGCGCCCC
GAACGCATCA TCGTCGGCGA GGTCCGCGGA CCCGAAGCCT TCGACCTCCT GCAAGCCATG
AACACCGGCC ATGACGGCTC GATGGGAACC CTGCACGCCA ACTCGCCGCG CGAGGCTATC
TCGCGCCTGG AATCCATGAT CACCACAGGC GGCTTCACGC TGCCCTCCAA GACGATCCGG
GAGATGATCG TTTCTTCAGT GGACGTCATC GTTCAGGCCG CGCGTCTGCG CGACGGATCG
CGGCGCATAA CCCACATCAC CGAAGTGCTG GGAATGGAAG GCGATGTCGT CATCACCCAG
GACCTCTTCG TCTATGACAT CCTCGGCGAG GATGCCAATG GCAGGCTGAT CGGGCGGCAT
CGCTCGACCG GCATCGGCCG TCCGGCCTTC TGGGACCGCG CGCGCTACTA CGGCGAAGAG
GCCCGCCTGG CGGCAGCGCT GGACGCCGCG GAAGCGAAGG CCGCGGCCTG A
 
Protein sequence
MIGRKSASQV QAIEQPAVQA PITRRAPEPA NQSEKLPATA PAASFAEKPS SYYELKKEVF 
SALIAAIDVA ALSVMEQSQA RKEIGAIIND IVAAKRAGIS QAEQNDLLRD ICDDILGYGP
LEPLLARDDI ADIMVNGANQ VFIEVGGQVQ ESGIRFRDNE QLLNICQRIV SQVGRRVDES
SPICDARLAD GSRVNVIAPP LAIDGPALTI RKFRKDKLTL DQLVTFGSIT PEGAELLKII
GRVRCNVLIS GGTGSGKTTL LNCLTGYIDD GERIVTCEDA AELQLQQPHV VRLETRPPNI
EGQGEITMRN LVKNCLRMRP ERIIVGEVRG PEAFDLLQAM NTGHDGSMGT LHANSPREAI
SRLESMITTG GFTLPSKTIR EMIVSSVDVI VQAARLRDGS RRITHITEVL GMEGDVVITQ
DLFVYDILGE DANGRLIGRH RSTGIGRPAF WDRARYYGEE ARLAAALDAA EAKAAA