| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0603 |
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| Symbol | |
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| ID | 4179348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 677994 |
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| End bp | 679010 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638066482 |
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| Product | type II secretion system protein |
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| Protein accession | YP_673168 |
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| Protein GI | 110632960 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.512211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGA GCACGGCGCT GGGGCCCACC CTCTTCCCAC TGATGGTCTT CGCATTCGCC
ACGCTTAGCG TCGGCGGCGT GGCAGCCGCC CTGTTCTATC CGCAGTTCGC CAAGGCAAGC
CCCTTCCGCA GGCGCTTCCA GGGCCTGGCC GCCTTGGGCG AGGAAGAGGA GAGCACCGCA
CCGGCAGACG AAGACAGGGA CCGCCGCAAA TCGGTCGAGA AGACGCTGCG GGAACTCGAG
GAAAAGCAGA AGGCCAAGAC AAGGAAAGCC GGAAAGCCAA CACTGAGCGG CAGGCTGCGG
CAAGCCGGCC TGAGCTGGAA CAGGCGAGCC TATTTCACCG CCTGCGCGGT CTGTGGCGCC
CTCACCTTTC CGGTGGCGCT TCTCCTCGGG GCGGGCAGTC TCGTTTCCGT CGGCTTTGCG
CTGGCCGGGG GACTGCTGTT GCCGCATTTC TACGTGGCGA GCCGCCGCAA GCGGCGCTTC
AAGCAGTTTA CCAACGAATT CTCCAATGCG GTGGACGTGA TCGTGCGCGG CCTGAAATCG
GGCTTGCCGG TGGGAGACTG CCTTCGCATC ATCGCCGCCG AGGCACAGGA GCCGGTCAAA
AGCGAATTTG TCGCGATCGT GCAGGACCAG ACGCTTGGCA TTTCCCTCGA CGAGGCCGTA
CAGCGGCTAT GGGAGCGCGT GCCGCTTGCG GAAGCAAACT TCTTCGCAAT TGTGGTGGGC
CTTCAAAGCC GGACCGGCGG CAGCCTGGCG GAAGCGCTCG GGAACCTTTC CAAGGTCCTG
CGCGAGCGCA AGAAGATGAG CGCCAAGATC AGGGCTATGA GCTCGGAAGC CAAATCCTCG
GCTGGCATTA TCGGCGCCCT GCCGTTCTTC GTATCGGCGG CCATCTACCT GACCAGCCCA
GACTATATGT CGCTTCTGTT CAGCACCCTC ACGGGAAAGC TCGTGCTCGC AGGCTGCGCA
CTCTGGATGG GCATGGGCAT CCTCGTCATG CGCAAGATGA TCAATTTCGA TTTTTGA
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| Protein sequence | MDLSTALGPT LFPLMVFAFA TLSVGGVAAA LFYPQFAKAS PFRRRFQGLA ALGEEEESTA
PADEDRDRRK SVEKTLRELE EKQKAKTRKA GKPTLSGRLR QAGLSWNRRA YFTACAVCGA
LTFPVALLLG AGSLVSVGFA LAGGLLLPHF YVASRRKRRF KQFTNEFSNA VDVIVRGLKS
GLPVGDCLRI IAAEAQEPVK SEFVAIVQDQ TLGISLDEAV QRLWERVPLA EANFFAIVVG
LQSRTGGSLA EALGNLSKVL RERKKMSAKI RAMSSEAKSS AGIIGALPFF VSAAIYLTSP
DYMSLLFSTL TGKLVLAGCA LWMGMGILVM RKMINFDF
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