| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0602 |
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| Symbol | |
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| ID | 4179347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 677015 |
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| End bp | 677986 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638066481 |
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| Product | type II secretion system protein |
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| Protein accession | YP_673167 |
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| Protein GI | 110632959 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0897257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGG CTTCCTACAT CCCCGAACCC GGACAGCTTT CCGCCCTGAT GGCGGCGGTG
GCGGCGTTTT CGTCCGTCAT CGTGGTTTCC TGGCCTTATC TTTTTCGCGA CAATCTCGCC
CGTCGCATGG CGAAGGTGGA GAATGAGCGG GAGCTCCTTC GCAAGCAGGA GCGGGCGCGA
CTTGCCATGC AAAAGCGCCT TCCTTCGCTC CGCAGCGAAC CGCGAAAACT CTTCAAGCAG
ATCGTCGATC GTTTCAAACT CGCAAAGCAG GGCGATAACG GACAGCTTGT GGACCGTCTC
CGCAGGGCAG GCTATCGCGG CAATGCGCCG GTCATCACTT TCCTTGCGGT GCGGCTCATC
GCACCGATCG CGATCTTTGC CGTCAGCCTC ACTTATGTTC TTCTCATCCT CAAGCCCGAC
CTGCCTCTTT TCGCGATCCT CGGCATCGCT GCCGCCCTGG GGGGCTTCGG CTATTTCGTG
CCGGCCCTTT ATATCCGGAA CAAGATCACC AAGCGGCAGA AGGCCATCCA GCGCGCCTGG
CCGGAGGCGC TCGACCTTCT GCTTATCTGC GTCGAATCCG GGATGAGCAT CGAAAGCGCC
TTCCGCAAGG TGGCCGAGGA GATCGGCACA CAATCCGCCG AGATAGCGGA GGAAATTGCG
CTGACGACGG CGGAGCTGTC CTTTCTTCAG GACCGGCGGC AGGCCTATGA AAATCTGGGC
CGGCGGACCG GCGTGGAGGG TGTGCGCGCA GCCGTCACCA GCCTCATCCA GGCGGAGAAA
TACGGCACGC CACTTGGCCA GGCGCTGCGC GTCATGGCGC AGGAGAACCG CGACATGCGC
ATGAGCGAGG CTGAAAAGCG CGCCGCCGCG CTACCCCCGA AGCTCACCGT ACCGATGATC
GTGTTCTTTC TGCCCGTTCT CTTCGCCGTC ATCATCACGC CGGCAGCGAT CCAGATCGCG
GGAATTCAAT AA
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| Protein sequence | MSLASYIPEP GQLSALMAAV AAFSSVIVVS WPYLFRDNLA RRMAKVENER ELLRKQERAR
LAMQKRLPSL RSEPRKLFKQ IVDRFKLAKQ GDNGQLVDRL RRAGYRGNAP VITFLAVRLI
APIAIFAVSL TYVLLILKPD LPLFAILGIA AALGGFGYFV PALYIRNKIT KRQKAIQRAW
PEALDLLLIC VESGMSIESA FRKVAEEIGT QSAEIAEEIA LTTAELSFLQ DRRQAYENLG
RRTGVEGVRA AVTSLIQAEK YGTPLGQALR VMAQENRDMR MSEAEKRAAA LPPKLTVPMI
VFFLPVLFAV IITPAAIQIA GIQ
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