| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0595 |
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| Symbol | |
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| ID | 4179340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 666990 |
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| End bp | 669182 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638066474 |
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| Product | periplasmic sensor diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_673160 |
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| Protein GI | 110632952 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA AAAATCTCAA TCTTGCAACG GAGATCCGAG TAGCCTTGGG CCTTATTGCT
GCATTCGCCG CAGCGGGGGC TATTGCCGTC TCGGTTGTCG CGTCTCTCAG GACCGATCAG
GATGCAATTC TGAAACAGGA GCAGCTGACC CGGCACGCGC TTGAGGAACA GATTGAGGCC
GTGCCGCGGG ACCAGCGCAG CGTTACCGTC TGGGATGAGG CCGTTGTTCA TTCGCGCGAG
AACGATCAGC GTTGGATGGC GGAATATCTC GGCAAATGGA TATACGACTA TTTCGGCCAT
CAGCGCGCCT ATGTTCTCGA CGACCAAGGA CATCTCATTT ACGCCATGCT TGACGGCAAG
ACGGTCTCAC CGCCGTCCTT CGGCAACGAA ATCGCGGAGG CTACGGAAAT TGCCTCCAGC
CTCCGGCGAA GGCTGATAGC ACGGCGCTCT GCGGGCGATC AGGCCGAGCC GATCAAAAGC
GTTGTGGAAA CGCGCGTGAT CGACCTGAAC GGCGCCCCAG CGATCCTGAG CATGCAGCCG
ATCATCCCGT CGACCAATCG TTTGACCGTA CCGGCGGGCG AGGAATATCT CTATGCTTCC
GTCAATATGG TGGATAGCGC GCTCGCCGAG GAGATCGGTC ACCATGTCCT ACTCCAGGGC
ATGCGCTTCG ATTCGTCTGC ACCGAAGGGT TACCGTCAGG CGAGTGTTCC CGTGACCGGT
TCTACAGGCG AGGTTTTGGG CTATCTGATA TGGGAGGCCG ACAGGCCGGG GCTCCATCTG
CTCAAGCAGG TGCTCCCGGC TTGCCTTATT GCCCTTTTTG CTGTGGGCGG GATTGCGCTT
TTCCTTGGCC GCAAGCTGCG CCGCGCTTCT CTCGCGCTTC ATGCGAGCGA GCGCCGCGCC
CGGCATCTCG CATCCCATGA TGTTCTCACG CGCCTGCCGA ACCGGGCCTT CTTCGAAAAG
AAGCTGGATA GGGTGATCGA CACGGTTCAA GCCGGCCACG GCGAGGCGGC GCTGCTCTTC
CTTGACCTGG ATCGTTTCAA AAACGTCAAC GACACTCTTG GTCACCGGGC CGGCGATGAG
CTGGTGCGGG AAACGGCTGT GAGGCTGAGC ACGGCGATCG GCAATGCCGG CGTCGTTGCA
CGCATAGGCG GCGACGAGTT CGGTATGGTG ATCCTGCGGA GGAGTGGGGC CCGGGAAGCG
GCGATCGAGC TTTCTGAAAG ACTGCTCCAG GCACTGAAGG TCCCCTTCGT CATCAGCGGC
GAGCCCGTGC ACGTTGGCGT CAGCATCGGC GTAGCCCTTG CCCCTGAAGC GGGCAGCGAG
CGTCAGGACC TCCTGCGCAA GGCCGACATC GCGCTTTATG ACGCCAAGAA GCGCGGCCGC
GGCTGTTACC AGATCTTCTC GGAGGCAATG GGCGATATTC TCAAGCAGCG CCGCCAGGTG
GAGGCTGACC TGCGCAACGC ACTGGCAAAC GGAGAGGAAC TGCAGCTCTT CTACCAGCCG
CTCTATTCCG ATGCGAGCGA GATTACCGGG GCTGAAGCGC TTCTGCGCTG GAAGCACCCG
GTCCACGGCT CAATGTCGCC GGTGTTTCTG ATCTCGGTGG CTGAGGAATC CGGCATGATC
ATGCAGCTCG GCGATTGGGT CTTGCGGGAA GCCTGCAGAA TGGCCGTCAA AGCCGATATC
CCCTTGATGT CGGTGAACGT GTCGGCGGTG CAGCTTCGCG ATGAGCACTT CGCAGAGCGG
TGCCTGGCGA TCATCCGCCA GGAGAACGTA GCGCCGGAAC GGATTCAGCT CGAGGTCACA
GAAACCGTGC TGATCGAAAA TCCGGACCTT ACCGTCAGGA TCTTCGAAAC GCTGCGTGAA
GCGGGCATCC GCATCGCGAT CGACGATTTC GGCACCGGCT ACTCTTCGAT GAGCTATCTC
CGCAACTATC CGGTCGACCG GCTCAAGATT GACCGTTCGT TCGTGCAGGC TCTTTCGGAA
AGCAAGCAGG GACGTGCAAT CGTTGGAGCC ATGCTCGACA TTGCGCGGGC GCTGGAGCTG
GACGTGGTCG CCGAGGGCGT GGAGACAGTG GACCAGTGCA AGGTTCTGCG CTCACTCGGC
TGCCGCGAGA TGCAAGGCTA TCTCTTCTCG CGCCCCCTCG AGCCGCTGCA GTTCCTGCAC
TCCCTGAAGC GTCCCGTTCC CTTGACCGCC TAG
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| Protein sequence | MTDKNLNLAT EIRVALGLIA AFAAAGAIAV SVVASLRTDQ DAILKQEQLT RHALEEQIEA
VPRDQRSVTV WDEAVVHSRE NDQRWMAEYL GKWIYDYFGH QRAYVLDDQG HLIYAMLDGK
TVSPPSFGNE IAEATEIASS LRRRLIARRS AGDQAEPIKS VVETRVIDLN GAPAILSMQP
IIPSTNRLTV PAGEEYLYAS VNMVDSALAE EIGHHVLLQG MRFDSSAPKG YRQASVPVTG
STGEVLGYLI WEADRPGLHL LKQVLPACLI ALFAVGGIAL FLGRKLRRAS LALHASERRA
RHLASHDVLT RLPNRAFFEK KLDRVIDTVQ AGHGEAALLF LDLDRFKNVN DTLGHRAGDE
LVRETAVRLS TAIGNAGVVA RIGGDEFGMV ILRRSGAREA AIELSERLLQ ALKVPFVISG
EPVHVGVSIG VALAPEAGSE RQDLLRKADI ALYDAKKRGR GCYQIFSEAM GDILKQRRQV
EADLRNALAN GEELQLFYQP LYSDASEITG AEALLRWKHP VHGSMSPVFL ISVAEESGMI
MQLGDWVLRE ACRMAVKADI PLMSVNVSAV QLRDEHFAER CLAIIRQENV APERIQLEVT
ETVLIENPDL TVRIFETLRE AGIRIAIDDF GTGYSSMSYL RNYPVDRLKI DRSFVQALSE
SKQGRAIVGA MLDIARALEL DVVAEGVETV DQCKVLRSLG CREMQGYLFS RPLEPLQFLH
SLKRPVPLTA
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