| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0593 |
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| Symbol | |
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| ID | 4179338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 662817 |
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| End bp | 665810 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638066472 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_673158 |
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| Protein GI | 110632950 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.967493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCT TGCGCGTTCC CGGCCGTGGC CGCGTAGACC ATTCCCAGCC GGTGAAATTC
ACCTTTGATG GCAGGATTGT CGAGGGGCGC GTGGGTGATA CCGTCGCCTC GGCTCTGTTG
GCGAATGGCG TGCACCTTAT GGGCCGGTCA TTCAAGTATC ACCGTCCGCG CGGCCCGGTT
ACCGCGGGTT CGGAAGAACC AAATGCGCTC ATCGGCACCA GCCGGGGTCC TGGCCGGTTT
GAGCCCAACA CCCGCGCAAC CATGCAGGAA ATTTGGGAAG GACTTGAAGC CACGAGCCAG
AACAAGTTCC CGAGCCTAGC ATTCGACTTG GGCGCGGTGA ACGATTGGTT CTACATGCTG
TATTCGGCGG GTTTCTACTA CAAAACCTTC ATGTGGCCGA AGTCCTTTTG GGATAAGGTT
TATGAGCCAT TCATCCGCGC GGCGGCGGGC CTGGGCGTGT CGCCGACCGA AGAAGATCCG
GACACCTACG CGTCGCGCTA TCTGCACACC GATGTGCTGA TTGTCGGTGC GGGGCCGGCG
GGTCTGGCGG CGGCTCTCTC GACGGCAAAA GCGGGCCTGC GGGTGACGCT GGTCGACGAG
AACGCAGAAG CCGGAGGAAC GCTTCTGAGC GAGCCTCAGG CAGAGATCGA CGGAACCCCC
GCCTGGAACT GGCTTGCGGC GACGCTCAAG GAACTTGAAG GCCTTGGCGT GCGCATCATG
ACGCGCACCA CCGCAATCGG CTATTACCAC CAGAATATGG TCGGGCTGTG CCAGAAGCTG
ACCGATCATT TGCAGTCTCC GCGGAAGGGC ATGCCGCGCG AGAGGCTTTG GCGGGTGAGG
GCAGGGCAGG TCATTCTGGC GCAAGGCGCG CTGGAAAAGC CGCTGGTCTT CGACGGTAAC
GACCGGCCGG GCGTGATGCT GGCGGGCAGC GCACAGATCT ATCTCAATCG ATATGGCGTG
CGTGTCGGGG AGAGGGCTGT CGTGGCAACG AGCCATGACA GCGCATGGTA TGCCGCCTTC
GATCTTGCGG ATGTCGGGAC GAAAATCGAA GCGATCGTGG ATACCCGCGC CAAGATCCGT
GAGGATCTGA TCTCCGAAGC GCGGTCCCGC GGTATCGCGG TGCTGACGAG CCATACGGTC
ACCGGCACGA AAGGGCGGCT GCGCGTGCAG GGCGTGCGGG TGAATCCGGT CACGGGAGGC
CGCGTCGGCC CCGCGCGGTG GCTTCCCTGC GACTGCCTGC TGATGTCGGG CGGCTGGACG
CCGTCACTGC ACCTGTTCTC GCACACCAAG GGTACGCTTC GGTGGGATGA AGAACGGCAG
ATCTTTCTGC CGGACCGTAA GACAGAAGCT TGCGAGATCG CTGGGGCTGG GCGTGGGCTT
TGGGGTATTG AGGCAGCGCT CAACGACGGT GCCGTTATGG ACGCGGCAGC CGCCCGCGAA
CATCGTCGTG AGCCGACCAC CGCCCGTTAT ACGGTCAAGC ACGACCGATG CGGTAGCGGC
GCTTCTCACA CGGAATTGCC GACCGACCGC AGCCCCGGCC GTGCTCGCGC CTTTGTCGAC
TTTCAGAACG ACGTGACAGC TAAGGATCTG CGCCTCGCAG TGCGCGAAGG AATGCGTTCG
ATCGAGCACG TCAAGCGCTA CACGACAAAC GGCATGGCCA CAGATCAGGG CAAGATGTCC
AATATCAACG GCCTCAATAT TGCTGCCGAT GCGCTCGGAA AACGGCAGCC GGAGGTAGGG
CTAACCACTT TCCGCCCGCC CTATACGCCC ACCACGTTCG GCGCATTGGC CGGCTATCAT
CGAGGCGGGC ATTTTGAGGT GACGCGCAAG ACGCCGATCG ATGGTTGGGC AGAGCAACAT
GGCGCGGTGT TCGAACCGGT CGGCCTGTGG CGGCGCGCGT GCTATTTCCC CAAGCCCGGT
GAAGATATGC ATGCGGCTGT GGGCCGAGAA TGCCGCACGA CGCGGGCTTC TGTGGGCATG
TTCGATGCCT CGACACTTGG CAAGATCGAG GTCGTGGGGC CCGATGCCGT TACCTTTATG
GAGCGGATAT ACACCAATCC CTGGGCCAAG CTCGGCATTG GCCGTTGCCG CTATGGTCTG
CTCCTGGGCG AAGACGGCTA TATCCGCGAT GACGGCGTGA TCGGGCGTCT CGCGGAGGAT
CGCTTCCACG TCACCACCAC CACGGGCGGC GCGGCGCGGG TTCTGAACAT GATGGAGGAC
TACCTCCAGA CCGAATGGCC GGACCTCAAG GTCTGGCTGA CCTCGACGAC CGAGCAGTGG
GCGGTGATTG CCTTGAATGG CCCGAACGCT CGCAAGCTGC TCGCGCCATT CGTCGGCGGG
CTGGACATTT CAGACGCGGC GTTCCCGCAT ATGTCGGCTG CGGAGTGCGC GGTTGCAGGC
TTCCCGGCGC GGCTGTTCCG CGTGAGCTTC ACCGGCGAGC TTGGCTTCGA AATCAACGTA
CCGGCCCGCT ATGGACGGTT GCTTTGGGAA AAGCTCTGGG AGGCAGGTCA GCAATACCAA
ATCTGCGCCT ATGGCACCGA GACGATGCAC GTTCTTCGTG CCGAAAAGGG GTACATCATC
GTGGGCCAGG ATACGGATGG CACGGTCACG CCGCATGACG CGGGGATCAG CTGGGCAATC
GGCAAGGCAA AGCCGGATTT CATCGGCAAG CGCGGGCTCC AGCGGGCCGA TCTTGTGGCC
GAGGGCCGCA AGCAACTGGT CGGTCTGCTG ACGGAAGATG GTAAGACCAA GCTGGAGGAG
GGTGCGCAGA TCGTGCTCGA CCCAAATCAG CCCATTCCGA TGAAAATGGT CGGCCACGTC
ACCTCGTCCT ACCACAGCGA TGCGGTAGGC AGGCCGATTG CCCTGGCACT GATCGAGGGC
GGGTACAGCC GGATGGGCGA GTCGGTTTTC GTGCCCATGC CCGGCCGCGT CATCAAGGCC
GAAGTCACGG GAACTGTCTT CTATGACCCC GCCGGCGAAC GGCTGAAACT TTAG
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| Protein sequence | MNSLRVPGRG RVDHSQPVKF TFDGRIVEGR VGDTVASALL ANGVHLMGRS FKYHRPRGPV
TAGSEEPNAL IGTSRGPGRF EPNTRATMQE IWEGLEATSQ NKFPSLAFDL GAVNDWFYML
YSAGFYYKTF MWPKSFWDKV YEPFIRAAAG LGVSPTEEDP DTYASRYLHT DVLIVGAGPA
GLAAALSTAK AGLRVTLVDE NAEAGGTLLS EPQAEIDGTP AWNWLAATLK ELEGLGVRIM
TRTTAIGYYH QNMVGLCQKL TDHLQSPRKG MPRERLWRVR AGQVILAQGA LEKPLVFDGN
DRPGVMLAGS AQIYLNRYGV RVGERAVVAT SHDSAWYAAF DLADVGTKIE AIVDTRAKIR
EDLISEARSR GIAVLTSHTV TGTKGRLRVQ GVRVNPVTGG RVGPARWLPC DCLLMSGGWT
PSLHLFSHTK GTLRWDEERQ IFLPDRKTEA CEIAGAGRGL WGIEAALNDG AVMDAAAARE
HRREPTTARY TVKHDRCGSG ASHTELPTDR SPGRARAFVD FQNDVTAKDL RLAVREGMRS
IEHVKRYTTN GMATDQGKMS NINGLNIAAD ALGKRQPEVG LTTFRPPYTP TTFGALAGYH
RGGHFEVTRK TPIDGWAEQH GAVFEPVGLW RRACYFPKPG EDMHAAVGRE CRTTRASVGM
FDASTLGKIE VVGPDAVTFM ERIYTNPWAK LGIGRCRYGL LLGEDGYIRD DGVIGRLAED
RFHVTTTTGG AARVLNMMED YLQTEWPDLK VWLTSTTEQW AVIALNGPNA RKLLAPFVGG
LDISDAAFPH MSAAECAVAG FPARLFRVSF TGELGFEINV PARYGRLLWE KLWEAGQQYQ
ICAYGTETMH VLRAEKGYII VGQDTDGTVT PHDAGISWAI GKAKPDFIGK RGLQRADLVA
EGRKQLVGLL TEDGKTKLEE GAQIVLDPNQ PIPMKMVGHV TSSYHSDAVG RPIALALIEG
GYSRMGESVF VPMPGRVIKA EVTGTVFYDP AGERLKL
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