| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0591 |
|---|
| Symbol | |
|---|
| ID | 4179336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 661257 |
|---|
| End bp | 662510 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638066470 |
|---|
| Product | sarcosine oxidase beta subunit family protein |
|---|
| Protein accession | YP_673156 |
|---|
| Protein GI | 110632948 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTT TTTCCGCCCT GTCGATTTTG AAGAATGCGC TGATCGGCAA CACCGGTTGG
AGGGAGCAAT GGCCCGAATC CCAGCCGAAA GCGGAATATG ATGTCGTGAT CGTCGGCGCA
GGCGGGCATG GGCTGGGCGC GGCCTATTAC CTGGCCAAGG AGCATGGGAT CACCAATGTC
GCGGTGATCG ACAAAGGCTG GCTCGGCGGC GGGAATACAG GACGCAACAC GACCATCATC
CGTTCCAACT ACCTCTATGA CGAAAGCGCC CGGCTTTATG ACCATGCGCT CGATTTGTGG
GACGGGCTGA GCCAGGAATT GAATTACAAC GTCATGTACT CGAAGCGCGG CGTGATGATG
CTGGCGCATA ACGTGCATGA TGTTCAGAGT TTTCAGCGGC ATATCCACTC GAACCGCCTC
AACGGCGTCG ACAACCGTTG GCTCACCCCC GAAGAGGCGA AGGCATATTG CCCGCCGCTC
AACATCTCGA AGAGCGCGCG TTACCCGGTT ATGGGTGCAG CGCTGCAGAA GCGTGCGGGC
ACCGCACGGC ATGACGCGGT TGCCTGGGGT TATGCGCGCG GCGCTGCGAT GCGTGGCGTG
GATATTATCC AGAACTGCCC GGTTACCGCT ATCCGCCGCG GCCCGGATGG GCGGGTGACC
GGCGTGGAGA CTGCGAAGGG CTTCATCAGG GCCAAGAAGG TGGGCGTTTC GGCCGCGAGC
AACACCACGG TTGTCATGGA CAGTGCGGGG GTGAGGCTGC CGATCGAGAG CTTCCCGTTG
CAGGCGCTCG TTTCAGAACC TGTGAAGCCA ATCTTCCCTT GTGTCGTGAT GTCGAACACG
GTGCACGCCT ATATCAGCCA GTCCGACAAG GGCGAGCTGG TGATTGGTTC GGGTACCGAC
CAGTACACCA GCTATTCGCA GCGCGGCGGC CTTCCGCTGA TCGAACATAC GATTGCGGCG
ATCTGCGAGA TTTTCCCGAT CTTCACCCGC ATGCGGATGC TGCGCAACTG GGGCGGCATC
GTTGATGTGA CGCCCGATCG CTCGCCGATC CTTGGCAAGA CGCCGGTGCC AGGGCTCTAT
GTCAACTGTG GTTGGGGCAC GGGCGGATTC AAGGCCACGC CTGGGTCCGC GCATGTGTTT
GCCTGGACCA TCGCCAAGGA CGAGCCGCAC CCGGTCAACG CGCCGTTCAC GCTCGAACGC
TTCCGCGCCG GTCGCCTCAT CGATGAAGCC GCTGCGGCGG CCGTTGCCCA TTGA
|
|---|
| Protein sequence | MTRFSALSIL KNALIGNTGW REQWPESQPK AEYDVVIVGA GGHGLGAAYY LAKEHGITNV
AVIDKGWLGG GNTGRNTTII RSNYLYDESA RLYDHALDLW DGLSQELNYN VMYSKRGVMM
LAHNVHDVQS FQRHIHSNRL NGVDNRWLTP EEAKAYCPPL NISKSARYPV MGAALQKRAG
TARHDAVAWG YARGAAMRGV DIIQNCPVTA IRRGPDGRVT GVETAKGFIR AKKVGVSAAS
NTTVVMDSAG VRLPIESFPL QALVSEPVKP IFPCVVMSNT VHAYISQSDK GELVIGSGTD
QYTSYSQRGG LPLIEHTIAA ICEIFPIFTR MRMLRNWGGI VDVTPDRSPI LGKTPVPGLY
VNCGWGTGGF KATPGSAHVF AWTIAKDEPH PVNAPFTLER FRAGRLIDEA AAAAVAH
|
|---|
| |