| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0560 |
|---|
| Symbol | |
|---|
| ID | 4180079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 618177 |
|---|
| End bp | 619805 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 638066441 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_673127 |
|---|
| Protein GI | 110632919 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000861738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGAGA TAGAAAAGCT TAGCATCGTT CTTCCTTCCG GCGCCGACAG GGCTCTCGCG
ATTAAGGACG TTTCGTTCAG CGTGAAGTCC GGTTCAACGC TTTGTCTTGT GGGCGAATCC
GGGTCGGGGA AATCGGTTAT CGGACAAGCC GTTGCAGGGC TCCTACCGCA AACCCTTCAC
TGTTTGAAAC AGAGTTCCAT ACGCCTTGGC GGCCGAAACT TGCTGTCGCT AGACGAATGT
GCGTGGCGCC GTATTCGAGG GCGGGAAATC GGAATGGTGT TTCAGGAGCC GATGACTGCC
TTGAATCCGC TGATGCCAGT CGGGCAGCAG ATTGCTGAAG TTTACCGGTC ACACGGCTTG
CGCCTCAGGA AGGCGGAAGT CCGGGACCGG GTTGAAGGTT TGCTCGAGCG TGTCGGGATA
AAGGACCCGG CCCGCATCTC GAAATCCTAC ACGTTCCGCA TGTCAGGCGG TCAGAGGCAG
CGTGCTATGA TAGCCATGGC CGTGGCAATG AAGCCCAAGG TGCTTATTGC CGATGAGCCG
ACCACAGCGC TCGATGTGAC GACGCAAAGA CAGGTTCTTG ACTTGTTGGC CGACTTTCAG
GCTGAAACCC GAATGGCACT CATATTCATC ACGCATGATT TTGGGATCGT GGCGGATATT
GCCGACGAAG TCGCTGTCAT GGAAAGCGGA AACCTTGTCG AGTTCGGCTC GAAGGAAGAT
GTTTTGGCTC GCGCGCAGCA CCGCTACACT CGAAAATTGC TCGCAGCTGT TCCGCGCCTT
CATGAGCATA AGGCTTCGGT TGCCGAGCGA TCGACACCGG TGCTCGAAGT GCGCGGCTTG
AGCAAAACGT ATGGAGTGGC AACGAGCATC TTCAGAAGGC AGGACATGAG GGTCCTGAAC
GATGTCAATT TCAAGGTTTG CAAAGGCGAG GTTGTCGCGC TTGTAGGGGA GTCCGGATCC
GGCAAATCAA CAATTGCAAA ATGCCTGACG CGTCTCACGT CGATAGACAC CGGTTCGATC
CGTCTTGACG GGGCAGATAT GCTGAGCCTC AAAGGAGAGG CCCTAATGAA ACTGCGCCGC
AAGGTGCAGA TCGTATTCCA AGATCCGTAC GGATCTCTGA ATCCTCGCCA GAAGATCGTG
GATGCGGTAT CGGCCGGACC AATTGCGCAG GGGGTTGCGT CACGCGAAGC CCGTGAACTC
GCGGAGCACC TGCTCACGAT TGTCGGTCTG GGACGAAATG CACTCGACCG TTATCCTCAT
GAGTTCTCCG GCGGGCAACG TCAGCGCATT GGTATCGCCA GGGCTCTCGC CGCGAAGCCG
GAGGTTCTTA TTGCGGACGA AGCTGTCTCT GCTCTCGATG TTACGGTTCA AGCGCAGATT
TTGCGACTTC TTGCGGACCT AAGGGATCGA CTTGGACTCA CCATGCTTTT TATCACGCAC
GACCTGCGCG TCGCCGGTCA AGTGAGCGAT CGCATAATCG TCTTGAAGGC TGGGAATGTA
GTTGAAGAGG GTCCCACTCA AGCAATATTC ACCAAGCCAT CAAATCAGTA CACTTACTCT
CTTCTGCAGG CAATTCCCGG AATCTCATCA AACGAGTCCG CGTTGGTTCG GAATAAGTGC
GTGTGCTAA
|
|---|
| Protein sequence | MLEIEKLSIV LPSGADRALA IKDVSFSVKS GSTLCLVGES GSGKSVIGQA VAGLLPQTLH
CLKQSSIRLG GRNLLSLDEC AWRRIRGREI GMVFQEPMTA LNPLMPVGQQ IAEVYRSHGL
RLRKAEVRDR VEGLLERVGI KDPARISKSY TFRMSGGQRQ RAMIAMAVAM KPKVLIADEP
TTALDVTTQR QVLDLLADFQ AETRMALIFI THDFGIVADI ADEVAVMESG NLVEFGSKED
VLARAQHRYT RKLLAAVPRL HEHKASVAER STPVLEVRGL SKTYGVATSI FRRQDMRVLN
DVNFKVCKGE VVALVGESGS GKSTIAKCLT RLTSIDTGSI RLDGADMLSL KGEALMKLRR
KVQIVFQDPY GSLNPRQKIV DAVSAGPIAQ GVASREAREL AEHLLTIVGL GRNALDRYPH
EFSGGQRQRI GIARALAAKP EVLIADEAVS ALDVTVQAQI LRLLADLRDR LGLTMLFITH
DLRVAGQVSD RIIVLKAGNV VEEGPTQAIF TKPSNQYTYS LLQAIPGISS NESALVRNKC
VC
|
|---|
| |