| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0548 |
|---|
| Symbol | |
|---|
| ID | 4180010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 608528 |
|---|
| End bp | 609562 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638066430 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_673116 |
|---|
| Protein GI | 110632908 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3621] Patatin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATG TCCCGCCGCG GCGATCGGAC GGCACCATCC AACACGCACG CTTAAAGCAG
CCATGGCCGC GGGGCCGCCC GTTCCGCATC CTGTCGATCG ACGGCGGCGG AATTCGTGGC
GTCTTTCCGG CGGCAGTCCT GGCGGAACTA GAAAGCCGCT TCCTGGGCGG CGCATCCATC
GCAAATCACT TCGACATGAT CGCGGGCACG TCAACGGGCG GCATCATCGC GCTCGCCCTT
GCCCATGGGA TGACGGCTCG ACAGGCATTG AACATCTATC TTGAGCGCGG CGATCGCATC
TTTCCGCCGG CGGCTGGCCT CGGCAAGGTG TCGAGAGCGC TGCGCTGGGT GTTCAAACCG
AAGCACGACC AGACCGCCCT CAAGGACGAG TTACTGCGGA TCTTTGGTGG CAAAGTGCTC
GATGATGCCA TTACCCGGCT GGTGATCCCG AGCTTCGAAG GTCGCCACGG CGAGCCATTC
CTCTACAAGA CGCCGCACCA CCCGGACTAC CAGAAGGATC GCCACAAGAA GTTTGCCCAT
GTGGCGCTCC ACACGACGGC AGCCCCGTCC TATTACCCTG GCGTTGAGGA CGACGGTTAC
ATCATGATTG ATGGCGGCAT CTGGGCAAAC AATCCGGTCA TGAACGCCCT GGTAGACGCC
CTGGCCTGCT TCGACATCGC GCGTGAGGAC GTACGTATCC TGAGCCTGGG AACGGGTGAG
TCCACCTTCA CTGTCGATGA GCGGGCGCGC AACGGTGGGA TCAAGGATTG GGCGTTCCTG
CGCTCTTTCA ATGCGGCGGC ACGCGCACAG TCCCGAAATG CCCTCGGCCA GGCCTATCTG
CTGATCGGCA AAAACAACGT CACACGTATC GACGTGCCGG AAAGCGATGC GCCAATCGCA
ATGGACGACG TGCAACGCTC AATTCGGGAA CTGCCGATGG TAGCGCGCAG TCTTGTTGAA
GGCGCCGGGC ACCATATCGA GCGGGTATTT CTGGACGGCG AGGTCGAGCA GTATATCCGG
TGTCCGATAA CGTAG
|
|---|
| Protein sequence | MNYVPPRRSD GTIQHARLKQ PWPRGRPFRI LSIDGGGIRG VFPAAVLAEL ESRFLGGASI
ANHFDMIAGT STGGIIALAL AHGMTARQAL NIYLERGDRI FPPAAGLGKV SRALRWVFKP
KHDQTALKDE LLRIFGGKVL DDAITRLVIP SFEGRHGEPF LYKTPHHPDY QKDRHKKFAH
VALHTTAAPS YYPGVEDDGY IMIDGGIWAN NPVMNALVDA LACFDIARED VRILSLGTGE
STFTVDERAR NGGIKDWAFL RSFNAAARAQ SRNALGQAYL LIGKNNVTRI DVPESDAPIA
MDDVQRSIRE LPMVARSLVE GAGHHIERVF LDGEVEQYIR CPIT
|
|---|
| |