| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0546 |
|---|
| Symbol | |
|---|
| ID | 4180008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 606314 |
|---|
| End bp | 608023 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638066428 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_673114 |
|---|
| Protein GI | 110632906 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG AGCTGTGCGA CAAGCGAAAG GCGATCATCG CGCAGACCGG GCACCTGCTG
GTGCTCGGTG GACCGGGCTC AGGCAAGACG ACGATCGCGC TTTTCAAGGC ACAAGGCCGC
TTCGCGACGC TCAAGCCCGG TCAGGAAGTT CTGTTCCTGA GCTTCTCTCG CGCGGCGATC
CGTCAGGTCC TCCTACGCTG CAAAGAAATC CTGACGCCGA GCCAGCGCCG GGCCGTCGTG
GTCCAGACCT ACCACGCTTT CTGCATGGAG ATGCTGGAAG CACATGGGCG GCTGTTGCAT
GGGCGGTCGG TGCGTTTTCT TTACCCTGGC GAGGAACGGC TTCAGAAGTC CGCGTTCGAC
GGGGACTGGA GTGTCGAGCG CAAGCGTCAG GCAGCAGAAA TGGGGCTTTA TTGCTTTGAC
CTATTTGCGG CGGGCACGGC CGATCTGCTC GAAGGCTGCG CGGCGCTACG CGGGCTAGTC
GCTGATCGGT TCCCAATGAT TATCGTCGAT GAGTTCCAGG ACACCGACGA TAATCAGTGG
CGGATCGTGC GGGCGCTCGC CCAAGTGACC GACGTATTCT GTCTGGCGGA TCCGGAGCAG
CGGATCTTCG ATTATCGGGA CGACATCGAT CCTCGCCGGC TGGACATTCT GCGCGAGGCT
GTCGCGATCG CCGAATTCGA TCTCGGTGGC GAAAACCACA GGAGTCCGAA CGCCGGCATC
CTCCATTTTG CCGATGCGGT GTTGCGTAAT CAAGGTCCGC TGCCGGTGAC ACCTGACGTC
AAACAGGTGA GCTATTGGGG GAACGCTTTC TCCGCGACGG TTCATGCGGC GGTAATCTGG
ACTTTCAGTG CGTTGCGAAG AAAAGGTGTC GAGAAGCCGA GTGTCGCGGT GCTGTCGCGG
AGCAACTCGC TGATCTCTGA CCTTTCGGTT ATCCTTTCCG AGCCTCACAC CTACAACAAC
CAGCTGCTCT CCGTCATTGA GCATGATGTC GTGTGGGATG CGGAGCTATC GGCTGCGGCG
GCAATCGTGG TCGCATCGAT CCTGGAGTGG CCGACGGGGC TGGCCGCGGA GAGCTTGGCG
CGGACGCTTC TGGCGATCGC CGGCTTCTAC AAGCTGAAGA ACGCGGAAGA GCAAACCAAC
ACGGCAGCCG AGAACGCTCG CAAATATGAC GAGGCTGCGG CCAAGGTGGC GAAGGGTGAG
GAACCGCGGA TCAAAGCCGC GAAGGCATTG GTCGCCGCTC ATGCAGCCGG TGTCGCGTTG
ATCGGCGAGC CGGTGGCGGA CTGGAAGGTG GCGCGTCGCC TGCTTCAGGA CATCCCTGCG
CTCAGCGAAT TATTCCGCGA AGTGCGGCTT GTCCGCCTCT TCAGGGCGAC GGATGCCCTG
GCATCGGGCC TTAGTGAACG CTGGCTTGCA TCAGGCAGTT ACCGGGGTGC GAGTGACCTC
GTGAAGCGCA TCCTTGAACA GGAGCGGCTC ATCGCTGCCG AGCGCGATTC ACAGTTCGGC
TGCATTCTGA TGAATATGCA CAAGGCCAAA GGCAAAGAGT TCGATGGCGT GGTGCTTGTT
GAAGGTGCCT TCAAGTCGGG GTTCTTTGAC GAAAGGACTG AGCAACCCCC ATTTGAGCGC
AGCCGCCGGT TATTGCGAGT GGGTTTGACG CGGGCGCGGA CACTGGTGAC GATTGTTCGA
CCTCAAAATG CGAGGCCTTT GGTCGACTAG
|
|---|
| Protein sequence | MKLELCDKRK AIIAQTGHLL VLGGPGSGKT TIALFKAQGR FATLKPGQEV LFLSFSRAAI
RQVLLRCKEI LTPSQRRAVV VQTYHAFCME MLEAHGRLLH GRSVRFLYPG EERLQKSAFD
GDWSVERKRQ AAEMGLYCFD LFAAGTADLL EGCAALRGLV ADRFPMIIVD EFQDTDDNQW
RIVRALAQVT DVFCLADPEQ RIFDYRDDID PRRLDILREA VAIAEFDLGG ENHRSPNAGI
LHFADAVLRN QGPLPVTPDV KQVSYWGNAF SATVHAAVIW TFSALRRKGV EKPSVAVLSR
SNSLISDLSV ILSEPHTYNN QLLSVIEHDV VWDAELSAAA AIVVASILEW PTGLAAESLA
RTLLAIAGFY KLKNAEEQTN TAAENARKYD EAAAKVAKGE EPRIKAAKAL VAAHAAGVAL
IGEPVADWKV ARRLLQDIPA LSELFREVRL VRLFRATDAL ASGLSERWLA SGSYRGASDL
VKRILEQERL IAAERDSQFG CILMNMHKAK GKEFDGVVLV EGAFKSGFFD ERTEQPPFER
SRRLLRVGLT RARTLVTIVR PQNARPLVD
|
|---|
| |