| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0519 |
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| Symbol | |
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| ID | 4180800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 574843 |
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| End bp | 575388 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638066401 |
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| Product | TraF peptidase |
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| Protein accession | YP_673087 |
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| Protein GI | 110632879 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.19802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCGCG CCGGCTACCT GCTGACGGCC ACTGGCGCCG CGCTCCTGCT GATCACGCTG
GCGATGGTGC ACGTTGCACC GCGGCTCGTC TGGAACGCAT CGGCCAGCGT CCCGGTCGGC
CTCTATGAGA TCGGCTCGGC TACGCCGCTC GAGGTCACCG ACCTTGTCGC GGTCAATGCG
CCGGAGCCGC TTGCCGCATT CCTCGCGGAC CGGGGTTATC TGCCGCGCGG CGTACCGCTC
TTGAAGCGCG TTGCCGCACT TCCCGGGCAG ACAGTCTGCC GTTCGGAAGG GGACATTAGC
GTCGACGGGA TCACCGTCGG CAATGCGCTC GACCGCGACC GTCTGGGACG CACGCTGCCT
ATCTGGAGAG GCTGCCACCG GATCGGCGCG AGCGAACTCT TCCTCATGAA CATCGGCGTC
CGGGACAGCC TGGACGGCCG CTACTTCGGG CCTCTCGCCG TCACCACCGT GATCGGCCGG
GCCACGCCTC TCTACACCGA CGAAGACGGC GATGGTCGCT TCGTCTGGCG CGCGCCGACG
CGGTGA
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| Protein sequence | MTRAGYLLTA TGAALLLITL AMVHVAPRLV WNASASVPVG LYEIGSATPL EVTDLVAVNA
PEPLAAFLAD RGYLPRGVPL LKRVAALPGQ TVCRSEGDIS VDGITVGNAL DRDRLGRTLP
IWRGCHRIGA SELFLMNIGV RDSLDGRYFG PLAVTTVIGR ATPLYTDEDG DGRFVWRAPT
R
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