| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0506 |
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| Symbol | |
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| ID | 4182124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 559468 |
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| End bp | 561906 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638066388 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_673074 |
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| Protein GI | 110632866 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.496331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACC TCGCCGAATA TCGCCGAACC GCGACCCGCC TTGCAGATTT CCTGCCCTGG
GCGGCGCTGG TCGGCGAAGG GGTCGTGCTG AACAAGGACG GCAGCTTCCA GCGCACCGCG
CGCTTTCGTG GTCCCGATCT CGACTCTGCT GTGGCCGCCG AACTGGTGGC AGTCGCCAGT
CGCCTCAACA ACGCCTTCCG GCGTCTGGGC TCGGGCTGGG CGATCTTCGT CGAAGCGCAG
CGCCACGAAG CCGCCTCCTA TCCGGCAAGC CGCTTCGCGG ACGCCGCCTC CGCCCTCGTT
GATGCGGAGC GCAAGGCCGA CTTCGAGGAA GCGGACGCGC ATTACGAGTC GAGCTACTTC
TTGACCTTTC TCTATCTCCC GCCTGCCGAG GACGCCGCGC GGGCGGAAAC CTGGCTCTAC
GAGGGTCGCC AACAGTCCGG CGTCGATCCC CATGAAGCCC TCGCGGCCTT CATTGACCGC
ACAAACCGCG TCCTCCAGCT CGTCGATGGC TTCATGCCGG AATGCCGGTG GCTCGATGAC
GCCGAGACCC TGACTTACCT GCACTCGACC GTCTCGACGA AGCGCCACCG CGTCCGCGTG
CCCGAAACGC CGATCTACCT CGATGCGCTT CTCGCCGTTG AGCCGTTGAC CGGCGGCCTC
GAGCCACGGC TCGGCGCCGC TCATCTGCGC GTGCTGACGA TCAACGGCTT TCCGACGGCG
ACGACGCCAG GGATTCTCGA CGATCTCAAC CGGCTCGCCT TTCCCTATCG CTGGTCCACG
CGGGCGATCC TCCTCGACAA GACGGACGCC ACGAAACTGC TGACGCGCAT CCGGCGGCAG
TGGTTCGCCA AGCGCAAGTC GATCGCCGCA ATCCTGAAGG AGGTAATGAC CAACGAGGCC
TCCGCACTCG TCGATACGGA CGCTGCGAAC AAGGCCGCCG ATGCCGACAT GGCCCTGCAG
GAGCTTGGGG CCGACTATGC CGGTCAGGCC TATGTGACCG CCACGGTCAC AGTCTGGGAC
GCCGATCCGC GCACCGCCGA CGAGAAGTTG CGCCTCGTGG AAAAGGTGAT CCAGGGCCGC
GACTTCACCG CGATGTCCGA GACCATCAAT GCCGTCGATG CCTGGCTCGG TTCGCTGCCC
GGCCATGTCT ACGCCAACGT CCGCCAGCCA CCGATCTCCA CTCTAAACCT CGCCCACATG
ATTCCGCTCT CGGCGGTCTG GGCCGGGCCG GAACGGGACG AGCATTTCGG AGCGCCGCCG
CTGCTGTACG GCAAGACCGA AGGGAGCACG CCGTTCCGCT TTTCGCTGCA TGTCGGCGAC
GTCGGCCACA CACTGGTCGT CGGGCCGACA GGCGCGGGCA AGTCCGTGCT GCTCGCGCTC
ATCGCACTTC AGTTCCGGCG CTATCCGGGC AGCCAAGTCT TCGCCTTCGA CTTCGGCGGC
TCCATTCGCG CGGCCGCGCT CGCCATGGGA GGCGATTGGC ACGACCTCGG TGGCAGCCTG
ACGGACGGCG CCGCGTCGTC GGTCTCCCTC CAGCCACTCG CACGCGTTCA CGAGACCCAT
GAGCGTGCCT GGGCAGCCGA CTGGATTGCC GCCATCCTTG CCCGCGAGAG CGTCACGATC
ACGCCGGAAG TGAAAGAACA TCTCTGGACG GCGCTGACCT CGCTGGCGTC CGCGCCGATC
ACAGAGCGCA CGCTGACGGG CCTCGCCGTC CTCCTCCAGT CGAACGATCT CAAGCAAGCG
CTGCGCCCCT TTTGCGTCGG CGGTGCCTAC GGACGGCTGC TGGACGCCGA AGGCGAGCAG
CTAGGGGAAG CTGCGGTCCA GGCCTTTGAA ACCGAGGGGC TGATCGGCGG CGGCGCGGCG
CCGGCGGTCC TCGCCTATCT CTTCCATCGG ATCGGCGACC GTCTGGATGG ACGGCCCACG
CTCCTGATCG TCGACGAAGG CTGGCTCGCG CTCGACGATG AAGGCTTCGC GGCGCAACTG
CGCGAATGGC TGAAGACGCT GCGCAAGAAG AACGCGTCGG TCGTCTTCGC CACGCAATCG
CTGGCCGACA TCGATGGGAG CGCGATCGCT CCGGCCATCA TCGAAAGCTG CCAGACGCGC
CTTTTGCTGC CGAACGAACG CGCGATCGAA CCCCAGATCA CCACGATCTA CCGGCGCTTC
GGCTTGAACG ACCGCCAGAT CGAGATCCTC AGCCGGGCCA CACCCAAGCG CGACTATTAC
TGCCAGTCGC GGCGCGGCAA CCGGCTATTC GAGTTGGGGC TCTCCGAAGT CGCCCTCGCG
CTCTGCGCGG CATCCTCGAA AACTGATCAG GCCGCCATCG AGGCGATCCT CGCCGAGCAT
GGCCGCGACG GCTTCCTGTC CGCCTGGCTG CGCGCCCGCG ATGTCGGATG GGCCGCCGAC
CTCATTCCCG ATCTCACCAA CCTGGAGCCC AAGCCATGA
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| Protein sequence | MMNLAEYRRT ATRLADFLPW AALVGEGVVL NKDGSFQRTA RFRGPDLDSA VAAELVAVAS
RLNNAFRRLG SGWAIFVEAQ RHEAASYPAS RFADAASALV DAERKADFEE ADAHYESSYF
LTFLYLPPAE DAARAETWLY EGRQQSGVDP HEALAAFIDR TNRVLQLVDG FMPECRWLDD
AETLTYLHST VSTKRHRVRV PETPIYLDAL LAVEPLTGGL EPRLGAAHLR VLTINGFPTA
TTPGILDDLN RLAFPYRWST RAILLDKTDA TKLLTRIRRQ WFAKRKSIAA ILKEVMTNEA
SALVDTDAAN KAADADMALQ ELGADYAGQA YVTATVTVWD ADPRTADEKL RLVEKVIQGR
DFTAMSETIN AVDAWLGSLP GHVYANVRQP PISTLNLAHM IPLSAVWAGP ERDEHFGAPP
LLYGKTEGST PFRFSLHVGD VGHTLVVGPT GAGKSVLLAL IALQFRRYPG SQVFAFDFGG
SIRAAALAMG GDWHDLGGSL TDGAASSVSL QPLARVHETH ERAWAADWIA AILARESVTI
TPEVKEHLWT ALTSLASAPI TERTLTGLAV LLQSNDLKQA LRPFCVGGAY GRLLDAEGEQ
LGEAAVQAFE TEGLIGGGAA PAVLAYLFHR IGDRLDGRPT LLIVDEGWLA LDDEGFAAQL
REWLKTLRKK NASVVFATQS LADIDGSAIA PAIIESCQTR LLLPNERAIE PQITTIYRRF
GLNDRQIEIL SRATPKRDYY CQSRRGNRLF ELGLSEVALA LCAASSKTDQ AAIEAILAEH
GRDGFLSAWL RARDVGWAAD LIPDLTNLEP KP
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