| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0505 |
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| Symbol | |
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| ID | 4182123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 558710 |
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| End bp | 559471 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638066387 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_673073 |
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| Protein GI | 110632865 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00617649 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGATCC GACGCTCTCG CGCGGCGCTG TTCGCCGCAA CCATCCTGTC GCTGCCCGTC
GCCTTCTCGC CCGTGTTCGT GACCCCGGCA GCGGCGCAGT GGGTCGTTTA TGATCCGACC
AACTACGTCC AGAATGTCCT ATCGGCCGCG CGGGCGCTCG AGCGGATCAA CAACCAGATC
CAGAGCCTCC AGAACGAAGC GCAGATGCTG ATCAACCAGG CCCGCAATCT CGCGAGCCTG
CCCTATTCCT CGCTTCAGCA GCTCCAGCAA TCGGTGCAGC GCACGCAAGC GCTTCTGGGT
CAGGCACAGC GCATCGCCTT CGACGTGCAG CAGATCGACC AAGCCTTTCA GAGCCAGTAC
AGCAACATCT CGCTGTCCAC TTCGGATCAG CGTCTCGTCT CCGATGCACG ATCGCGCTGG
CAGAACACGG TCGGCGGCCT TCAGGACGCG CTGCGCGTGC AGGCCGGTGT CGTCGGCAAT
ATCGACACCA ACCGCGCCGA GATGGCGGCT CTGGTCGGGC AGAGCCAGGG TGCGACCGGC
GCGCTTCAGG CAACCCAGGC CGGCAACCAG TTGCTCGCAT TGCAGGCGCA GCAACTCGCA
GACCTGGTCG CTGTGGTCGC TGCGAACGGC CGAGCGCAGG CGCTTGTCGA TGCCGAGCGA
GCCGCAGCCG CCGAACAAGG CCGTGAACAG CGCCGCCGGT TCTTGACGCC CGGCTCCGGC
TATCAGCCCG GCAACGCCCG GATGTTCCCG AACGGCAACT GA
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| Protein sequence | MMIRRSRAAL FAATILSLPV AFSPVFVTPA AAQWVVYDPT NYVQNVLSAA RALERINNQI
QSLQNEAQML INQARNLASL PYSSLQQLQQ SVQRTQALLG QAQRIAFDVQ QIDQAFQSQY
SNISLSTSDQ RLVSDARSRW QNTVGGLQDA LRVQAGVVGN IDTNRAEMAA LVGQSQGATG
ALQATQAGNQ LLALQAQQLA DLVAVVAANG RAQALVDAER AAAAEQGREQ RRRFLTPGSG
YQPGNARMFP NGN
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