| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0503 |
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| Symbol | |
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| ID | 4182121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 557065 |
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| End bp | 558414 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638066385 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_673071 |
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| Protein GI | 110632863 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.19353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGCA GCGGCGTCAT CGACAATTTC CTCGGGGTCT TCACCTCCTA CATCGACAGC
GGATTCGGCC TGCTCGGCGG CGAGGTGGCG TTCATCGCGA CGACGCTGAT CGTCATCGAC
GTCACGCTGG CCGCCCTGTT CTGGAGCTGG GGCGCGGACG GCGACATCAT CGCACGCCTT
GTGAAGAAGA CGCTGTTTGT GGGCGTCTTC GCCTACATCA TCGGCAACTG GAACAACCTC
GCGCGGATCG TCTTCGAAAG CTTCGCCGGC CTCGGACTTC AGGCGTCTGG CACCGGGTTT
TCCATCCAGG ACCTGATGCG CCCGGGCCGG GTCGCGCAGA CGGGTCTCGA TGCGGCGAGG
CCGCTGCTCG AATCCATCTC AAACCTGATG GGCTGGATCG CCTTCTTCGA AAACTTCATC
CAGATCGCCT GCCTGCTCTT CGCCTGGGCG CTGGTGCTGC TCGCCTTCTT CATCCTCGCC
ATCCAGCTCT TCATCACGCT GATCGAATTC AAGCTGACCA CCCTGGCCGG CTTTGTCCTG
ATCCCGTTCG GCCTGTTCGG GAAGACCGCC TTCATGGCCG AGCGCGTGCT GGGAAACGTC
ATCTCGTCAG GGATCAAGGT ACTGGTGCTC GCCGTCATCA TCGGCATCGG CTCGACTCTG
TTCAGTCAGT TCACGGCAGG ATTCGGCGGT CAGCCACCGA CCATCGACGA CGCGATGGCC
GTCGTATTGG CGGCGCTGTC GCTTCTCGGT CTCGGCATAT TCGGTCCGGG TATCGCCAAC
GGCATCGTTT CCGGCGGCCC GCAACTCGGC GCAGGCTCCG CCATCGGCAC CGGCCTCGTC
GCGGGCGGCG CAGCCATGGC TGCCGGCGGC GCGGCCGGGC TCGCCCTGCG CGGTGGCGCG
AGCGCCATTT CCGGCGGCGC CGCCGCCATG CGCGGTGGAG CCACCGCGGC GGGAGCCGCC
TCTGCTGCCT ACAGTCTCGG TTCCCTCGGC CAGTCGGGCG CTGCCGGCGT CGCGTCGGGC
CTCGGCGGCG TCGCACGAGC GGCCGGCGGC GCGGCAGCCT CTCCGCTGCG CCGGGCCGCG
CAAAGCGTTC GCTCGAGCTT CGCCGACGGC GTCAAAAGCG GCTTCGGAGC CACCGGCGGT
TCCTCGAGCA TGGGAACGGT CGCGAATGAT GCCGGTTCGG CCGCACCGGC AGCCACAGGC
TCTGCCGCCA GCCCGCCGGC TTGGGCGCAG CGCATGCGAC GTGGGCAGAC CATGAGCCAC
GGCGTCACGC TCGCGGCACA CGCGATCCGA TCGGGCGACA GCCACGGCGG CGGCTCTTCC
ATCAATCTCT CCGGAGGCGA CCGCACATGA
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| Protein sequence | MGGSGVIDNF LGVFTSYIDS GFGLLGGEVA FIATTLIVID VTLAALFWSW GADGDIIARL
VKKTLFVGVF AYIIGNWNNL ARIVFESFAG LGLQASGTGF SIQDLMRPGR VAQTGLDAAR
PLLESISNLM GWIAFFENFI QIACLLFAWA LVLLAFFILA IQLFITLIEF KLTTLAGFVL
IPFGLFGKTA FMAERVLGNV ISSGIKVLVL AVIIGIGSTL FSQFTAGFGG QPPTIDDAMA
VVLAALSLLG LGIFGPGIAN GIVSGGPQLG AGSAIGTGLV AGGAAMAAGG AAGLALRGGA
SAISGGAAAM RGGATAAGAA SAAYSLGSLG QSGAAGVASG LGGVARAAGG AAASPLRRAA
QSVRSSFADG VKSGFGATGG SSSMGTVAND AGSAAPAATG SAASPPAWAQ RMRRGQTMSH
GVTLAAHAIR SGDSHGGGSS INLSGGDRT
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