| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0502 |
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| Symbol | |
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| ID | 4182120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 556379 |
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| End bp | 557068 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638066384 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_673070 |
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| Protein GI | 110632862 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0478499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCT TCAAGCGACC CGCAACCCAC TATGGAAAGA CGCCCGGGCC CGAGACGCCG
TATCAGCGCG CGGCGCAGAT CTGGGATGAT CGAATCGGCT CAGCGCGTGT CCAGGCCCGA
AACTGGCGGC TCATGGCCTT CGGCTGCCTG ATCCTCTCCG CCGGCTTCGC TGCCGCGCTG
GTCTGGCAGT CGGCGCGCGG GACCATCGTC CCGTGGGTGG TGCAGGTCGA CAATCTCGGC
CAGGCGCAGG CGGTCGCGCC AGCGCAGGCC GACTACCGCC CCACCGACCC GCAGGTGGCC
TGGCATCTGG CGCGGTTCAT CGAGCAGGTC CGCTCGATCC CGGCCGACGC CATCGTCGTG
CGGCAGAATT GGCTGCGCGC CTACGAGTTC ACGACCGATC GCGGCGCGGC GGCCCTCAAT
GACTTCGCCC GCGCCAACGA TCCGTTCACC CGCGTCGGGA AGCAGCAGGT GTCGATCGAA
GTGTCGAGCG TTATCCGCGC GTCGCCTGAC AGCTTCCGCG TCGCCTGGAC CGAACGCCAA
TACGAGAACG GCCAGCTCTC CACGACACAA CGCTGGACAG CCATCCTGAC CATCGTGATC
CAACCCCCAC GCGACGCAGA GCGGCTGCGG GCCAATCCGC TCGGAATCTA CGTCAACGCC
ATCAACTGGT CTCGGGAGAT GGGGCAATGA
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| Protein sequence | MSFFKRPATH YGKTPGPETP YQRAAQIWDD RIGSARVQAR NWRLMAFGCL ILSAGFAAAL
VWQSARGTIV PWVVQVDNLG QAQAVAPAQA DYRPTDPQVA WHLARFIEQV RSIPADAIVV
RQNWLRAYEF TTDRGAAALN DFARANDPFT RVGKQQVSIE VSSVIRASPD SFRVAWTERQ
YENGQLSTTQ RWTAILTIVI QPPRDAERLR ANPLGIYVNA INWSREMGQ
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