Gene Meso_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0490 
Symbol 
ID4181124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp544754 
End bp545527 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content56% 
IMG OID638066372 
ProductABC transporter related 
Protein accessionYP_673058 
Protein GI110632850 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGGA TCAACATCAG GAACGCCAGC GTCAGTTACT TTCTCAGAAA GTCTGGCGCC 
AAGGTAAAAA GTCTGGAGCG CGGCGCAGTC GGTGCGCAAA TCGTGGCTGG GAGGCGTTAT
CTTGAAATAA CGGCGCTGAA GAACATCACG CTATCGCTCA ACGATGGCGA TCGCGTCGGT
CTTGTCGGCA TCAACGGCTC GGGGAAATCA ACCCTGCTAA AGCTCTGCGC TGGCGCGCTC
GCCGCGCAAT CCGGAACGGT GGCAATCGAA GGCAGGGTGA GCCCGCAATT CGCACTCGGA
TCAGGCATGA AACCGGCGCT GACGGGGCGG CAGAATACGG AGCTGAAATG CCTCTATATG
GGTGTGCCGC AGAGCGCAAT CGCCGCCCAT GTGGAAGAGG TGAAAGCGCT TTCCGGGCTC
GGCGGGTATT TTGAGTTGCC AATACAAAGC TATTCGGCCG GAATGCGGTC ACGACTCGTG
ATGAGTCTGC TGCGTCTGGT GCGCGGCGAA ATTTTGATCA TGGATGAGTG GATAAATGCA
GCCGATCCCT CGCTTAGCAC CAAGGTAAGC GGTTTGCAGG CACAGCTAGT GGAAAGGGCA
AAGATCCTCT TGCTCGCCAG CCACTCACGC CGTGTCCTTG AGGAATGGGT GGATACTCTT
GCATGGCTCG ATCAAGGCGA AATTCTTGCA TTAGGCAGAG TAGGTGAGGT GTATCCTGAA
TACCAGACGT GGATGAAAAC CCGGAAGATA GAGCGACAGA ACTCACCGAC TTGA
 
Protein sequence
MARINIRNAS VSYFLRKSGA KVKSLERGAV GAQIVAGRRY LEITALKNIT LSLNDGDRVG 
LVGINGSGKS TLLKLCAGAL AAQSGTVAIE GRVSPQFALG SGMKPALTGR QNTELKCLYM
GVPQSAIAAH VEEVKALSGL GGYFELPIQS YSAGMRSRLV MSLLRLVRGE ILIMDEWINA
ADPSLSTKVS GLQAQLVERA KILLLASHSR RVLEEWVDTL AWLDQGEILA LGRVGEVYPE
YQTWMKTRKI ERQNSPT