| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0449 |
|---|
| Symbol | |
|---|
| ID | 4179990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 495271 |
|---|
| End bp | 496329 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638066331 |
|---|
| Product | xylose isomerase-like TIM barrel |
|---|
| Protein accession | YP_673018 |
|---|
| Protein GI | 110632810 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAGA CAATGAAGGG TCCCGGGATC TTCTTGGCGC AGTTCGCCGG GGATGACGCC
CCGTTCGACA CCCTGCCGAA CATCGCTAGC TGGGCCGCCG GCCTTGGCTA TAGGGGAATC
CAGATTCCCG CCTGGGACGG GCGCCTTTTC GACCTGAAGA AGGCATCGGA ATCCTCGGCC
TATTGCGACG AGGTGAAGGG CATTTGCAAA GATGCCGGCG TCGAGATCAC CGAGCTCTCC
ACGCATTTGA TCGGGCAACT CGTGGCGGTG CATCCGGCCT ATGACACGCC TTTTGACGGA
TTTGCTCCAG AAGGTGTGCG CGGCAACCCA AAGGCCCGGC AGGAATGGGC GGTGGAGCAT
ATGCTTCATG CCGCCAAGGC CTCGCGAAAT CTGGGCCTGG ATGTGAGCGT TTCCTTCTCC
GGCGCGCTGG CCTTCCCCTA TCTCTATCCC TGGCCGCAGC GGCCTGACGG CCTCATAGAT
GAAGCCTTTA CGGAGCTTGC CCGCCGCTGG AAACCCATTC TCGATGCCTA TGAGGACGCA
GGCGTGGACG TGGCCTACGA GCTGCACCCG GGTGAGGACA TCTTCGACGG CGCGACTTTC
GAGATGTTCT TGGAAAAGCT CGGCGGCCAC AACCGCTGCA AAATCAACTA CGATCCCTCG
CACTTTCTCC TGCAGCAACT CGATTATCTA GCCTTCATCG ACATCTATCA CGAGCGCATC
TCGGCCTTCC ACGTGAAGGA TGCCGAGTTC AACCCGGACG GCCGGCAGGG GGTTTATTCC
GGCTACCAGC CATGGGTGAA GCGTGCCGGC CGTTTCCGCT CTTTGGGAGA CGGGCAGGTG
GATTTCACCA GCATTTTTTC AAAGCTCGCG CAATATGGCT ATGACAGCTG GGCAGTGCTC
GAATGGGAGT GTGCGCTAAA GCACCCCGAG CAGGGGGCGG CCGAAGGCGC GCCCTTTATC
GAGCATCACA TCATCCGCGT TACCGAAAAG GCGTTTGACG ATTTCGCCGC TGGTACCAGC
GACCGGTCGA GTCTTCGCGC CATGCTCGGT ATCGTTTGA
|
|---|
| Protein sequence | MPKTMKGPGI FLAQFAGDDA PFDTLPNIAS WAAGLGYRGI QIPAWDGRLF DLKKASESSA
YCDEVKGICK DAGVEITELS THLIGQLVAV HPAYDTPFDG FAPEGVRGNP KARQEWAVEH
MLHAAKASRN LGLDVSVSFS GALAFPYLYP WPQRPDGLID EAFTELARRW KPILDAYEDA
GVDVAYELHP GEDIFDGATF EMFLEKLGGH NRCKINYDPS HFLLQQLDYL AFIDIYHERI
SAFHVKDAEF NPDGRQGVYS GYQPWVKRAG RFRSLGDGQV DFTSIFSKLA QYGYDSWAVL
EWECALKHPE QGAAEGAPFI EHHIIRVTEK AFDDFAAGTS DRSSLRAMLG IV
|
|---|
| |