| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0411 |
|---|
| Symbol | |
|---|
| ID | 4182243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 456427 |
|---|
| End bp | 457170 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638066293 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_672980 |
|---|
| Protein GI | 110632772 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCA TCGACCTGAA GGGGCGAAAG GCGATTATCA CCGGAGGATC GGGTGGCATC
GGGCTGGCCG TGGCGCGGCG CATGATCGCC TCGGGGGCCG AAGTCGCGCT CTGGGACCTT
GCATCCGAGA GTCTCCGGCA AGCCAAAGCG GAACTGGACA ACGTCGCAAC CGTCAGCGTG
GACGTCACCA GCGAAAGCGA CGTCGAGCGT GCGACGCAGG AGACGGCGGC CAAGCTGGGA
GGCATCGACA TTCTGGTCAA CGCGGCGGGG ATCGGCGGGG TGCGCAGCAC CGTGGCGCAA
TATCCGGTCG AGGCCTGGCG CAAGATCATA GAGGTGAACC TGACTGGCAC GTTCCTATGC
TGCCGTTCGG TCGTGCGCGA AATGGAAAAG ACCGGCTACG GGCGCATCGT GAACATTTCC
TCGATCGCCG GAAAGGAGGG GAACCCCTTC GGTTCAGCCT ACTCGGCTGC CAAGGCTGCA
GTGATCTCGC TGACGAAATC ACTCGCCAAG GAACTGCTCG CGACGGAGAT CCGCGTCAAT
TGCGTGACGC CCGCCGCCGT CGAGACGGAG CTGTTCCAAA AGATGTCGCC GGAATCCCAG
AGCGCCTCGC GTGAGCGCAT TCCGCTGGGG CGGCTTGGCC GTCCCGAGGA AATCGCAGCG
ATGATTGTCT GGATGTGCTC CGAGGAGTGC TCCTTCACCA CCGGCGCCGT CTTCGACCTG
TCGGGCGGCC GCGCGACCTA CTGA
|
|---|
| Protein sequence | MNLIDLKGRK AIITGGSGGI GLAVARRMIA SGAEVALWDL ASESLRQAKA ELDNVATVSV
DVTSESDVER ATQETAAKLG GIDILVNAAG IGGVRSTVAQ YPVEAWRKII EVNLTGTFLC
CRSVVREMEK TGYGRIVNIS SIAGKEGNPF GSAYSAAKAA VISLTKSLAK ELLATEIRVN
CVTPAAVETE LFQKMSPESQ SASRERIPLG RLGRPEEIAA MIVWMCSEEC SFTTGAVFDL
SGGRATY
|
|---|
| |