Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0382 |
Symbol | |
ID | 4182060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 424098 |
End bp | 424796 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638066264 |
Product | pyrimidine 5'-nucleotidase |
Protein accession | YP_672951 |
Protein GI | 110632743 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0582701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACC GCCCCGATCC CGCCCGATTC GCCCATGTCA CCGATTGGGT CTTTGATCTA GACAATACTC TCTACCCGCG CCACAGCAAC CTGTTCTCGC AAATCGACCT GAAGATGACG GCATATGTGT CCAAGCTTCT TCATATGCCG AGCGACGAGG CGCGCAAGCT GCAAAAGGAG CTTTACCGGG AATACGGGAC TACACTGCGT GGATTGATGG AACGTTATTC GGTCGACCCG GACGATTTTC TCGAACAGGT GCATGACATA GACTATTCCT GGATCAAGCC GGATCCCTTG CTCGGAGAGG CGATCCGCTC ACTGCCTGGC CGGAAATTCA TTTTCACCAA CGGCAATCGG GGCCATGCGG AGCGCGCGGC GCGGCAATTG GGTGTTCTTG AGCATTTCGA GGATATTTTC GACATCGTCG CGGCAGGGCT AAGGCCGAAG CCGGCCAAGG AGAGCTACGA TCTCTTCCTC GCGCTTTATA CCGTGATGGG TCCCAATTCA GTGATGTTCG AGGACCTTGC GCGAAACCTG ACCGTGCCCA AGGAGCGCGG CATGACGACG GTGCTCATCG TGCCAAGTAA CCTGGAGCCC ACCTACTCGG AGATATGGGA GCAAGATCTG GGCCATGCGG ATCACGTAGA CTATGTCACC GATGATTTGA CCGGTTTTCT AACCGCTATC CGGTCCTGA
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Protein sequence | MTNRPDPARF AHVTDWVFDL DNTLYPRHSN LFSQIDLKMT AYVSKLLHMP SDEARKLQKE LYREYGTTLR GLMERYSVDP DDFLEQVHDI DYSWIKPDPL LGEAIRSLPG RKFIFTNGNR GHAERAARQL GVLEHFEDIF DIVAAGLRPK PAKESYDLFL ALYTVMGPNS VMFEDLARNL TVPKERGMTT VLIVPSNLEP TYSEIWEQDL GHADHVDYVT DDLTGFLTAI RS
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