Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0355 |
Symbol | fumC |
ID | 4181954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 397121 |
End bp | 398512 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638066237 |
Product | fumarate hydratase |
Protein accession | YP_672924 |
Protein GI | 110632716 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0771995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGA CCCGCACCGA AACCGATACT TTTGGCCCGA TCGACGTCGC CGCCGATCGT TACTGGGGCG CGCAGACCCA GCGCTCTTTG ACCAATTTCC GCATCGGCGT GGAAAAGATG CCTGTTCCAC TGGTGCGCGC CTTTGGCATC GTCAAGCTTG CCGCCGCGGA GGTGAATACG AACCTTGGAA AGCTTGATCC CAAGCTTGGC GAAGCGATCG TTGCGGCGGC ACGCGAGGTG GTGGACGGGA AACTGGACGC GCACTTCCCG CTCGCCGTCT GGCAGACCGG TTCCGGCACA CAGTCGAACA TGAACGCCAA TGAGGTGATC TCCAATCGGG CAATCGAAAT GCTCGGCGGT GAGATGGGTT CAAAAAAGCC CATCCATCCA AACGATCACG TCAATATGAG CCAGTCGTCG AATGACAGCT TCCCCACCGC CATGCACATC GCGGCCGCCC GCGAGGCGGC GGAAGAGCTG TTGCCGGCGC TGGACCACCT GACCGCCACG CTGGAGGAAA AGGAACGGGC TTTCGGCGAT ATCGTCAAGA TCGGCCGCAC CCATACGCAG GACGCGACGC CTCTCACACT CGGCCAGGAA TTTTCCGGCT ATGTGGCAGC GCTGAGGCTC GGGCGAAAGC GTATCGAGGA TGCGCTGCAT GACGTGCATG CGCTGGCCCA GGGAGGCACT GCCGTTGGCA CTGGCTTGAA TGCGCCCAAG GGTTTCGACA GGGCCTTTGC GGATCGCGTC GCAGCCATCA CCGGCCTGCC CTTCCGCACT GCTGAAAACA AATTCGAGGC CTTGGCGAGC CACGGAGCGC TGAACGCCCT GCACGGCACG CTCAACGCGC TTGCCGGCGA TCTCTTCAAG ATCGCGAATG ATATCCGCTT CCTGGGTTCC GGTCCGCGCT CCGGGCTGGG CGAACTCAAG CTTCCCGAAA ACGAACCCGG ATCCTCGATC ATGCCCGGCA AGGTGAACCC GACCCAGGCG GAAGCTCTTA CCATGGTGGC CACGCAGATC ATGGGCAATC AGACCACGGT CTCGATCGCC GCCAGTCAGG GGCATTTCGA GCTCAATGTC TTCAAGCCTG TAATCGCAAA CGCCGTGCTG CAGTCAATTC GCCTGCTTTC CGACGCGATG CGCTCCTTCG CCGACAATTG CGTCAAGGGC ATAGAGGCGG ACGAAGTGCG CATTGCGGAG TTGATGCAGC GCTCGCTCAT GCTGGTGACG GCCCTGGCGC CCGTGATCGG CTACGACAAC GCGGCCAAGA TCGCCAAGAC GGCACACAAG AACGGAACGA CGCTGCGCGA GGAAGCGCTG AGGACCGGCC TTGTGACGGA AGAGGAATAC GACCGCATCG TGCGGCCGGA AAACATGATC TCACCGGGAT AG
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Protein sequence | MTKTRTETDT FGPIDVAADR YWGAQTQRSL TNFRIGVEKM PVPLVRAFGI VKLAAAEVNT NLGKLDPKLG EAIVAAAREV VDGKLDAHFP LAVWQTGSGT QSNMNANEVI SNRAIEMLGG EMGSKKPIHP NDHVNMSQSS NDSFPTAMHI AAAREAAEEL LPALDHLTAT LEEKERAFGD IVKIGRTHTQ DATPLTLGQE FSGYVAALRL GRKRIEDALH DVHALAQGGT AVGTGLNAPK GFDRAFADRV AAITGLPFRT AENKFEALAS HGALNALHGT LNALAGDLFK IANDIRFLGS GPRSGLGELK LPENEPGSSI MPGKVNPTQA EALTMVATQI MGNQTTVSIA ASQGHFELNV FKPVIANAVL QSIRLLSDAM RSFADNCVKG IEADEVRIAE LMQRSLMLVT ALAPVIGYDN AAKIAKTAHK NGTTLREEAL RTGLVTEEEY DRIVRPENMI SPG
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