| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0344 |
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| Symbol | |
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| ID | 4182709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 384219 |
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| End bp | 385640 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638066225 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_672913 |
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| Protein GI | 110632705 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.154444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC CGCAGATCGC TATCATGATG CTCGGGATCT TCATCCTCTG CATCTTCCTC
GGCTTCCCCA TCGCCTTCAC GCTGATGGCC CTAGGTGTGG GCTTCGGCTA CTATGCCTAT
TTCGACGCGA GCCGGATGTG GCGCTCCTAT AACCGTGCGG TGGAGGACGG CGCCGATAGC
TGGACGCTGA TCCAGACCTG GATCGATGGC TTCTTCAACA ACCGCATCTT CGACCTGTTC
GTGAACCAGA CCTACTCGGT CATGGCGAAC GAGGTGCTGA CCGCCGTCCC GCTTTTCCTG
TTCATGGGCT ACGTCGTCGA GCGCGCCAAC ATCGTCGACA AGCTCTTTTC CACGCTCTAC
ATCGCCGCGC GGCGCGTGCC CGGGGCCATG GCCGTAGCCG CGCTGATTAC CTGCACGCTT
TTCGCCACCG CCACCGGTAT CGTCGGCGCG GTGGTGACCC TGATGGGACT GCTCGCCTTT
CCAGCGATGC TGAAGGCGCG CTACGACACG AGCTTCGCCT CCGGCGTGAT CTGCGCCGGC
GGCACGCTCG GCATCCTCAT TCCGCCGTCG ATCATGCTGA TTGTCTACGC CGCGGCTTCC
GGCGTCTCGA TCGTGCGGCT CTATGCGGGC GCTCTTCTGC CCGGCCTGCT GCTCGCCGGG
CTCTACTTGG TCTACGTGAT CGGGCGCGCG ATTCTTCAGC CCTCCGTAGC GCCCAAACCA
AGCAAGGAAG ATGTGGGCGA TACGCCGATC GGCACGCTGC TGTTCATGAT CGTCACTTCG
TTCCTGCCGT TGGCCTTCCT CATCCTCGCC GTGCTCGGCT CTATCCTCTT CGGGCTGGCG
ACGCCGACGG AAGCTGCTTC CGCGGGCGCG CTCGGCGGTC TCATCCTGGC GGTCGCCTAT
CGCGCCCTCA CTTGGCAGCG GCTGCGCGAA TCCGTCTATC TCACCATGAA GACCACGGCC
ATGGTCTGCT GGCTCTTCGT CGGCTCCTGG GTGTTCTCCT CGGTTTTCTC ATATCTCGGC
GGAGAAGGCC TGATCCGGGA CTTCGTCACC GGCCTCGATA TGTCGCCGAT CATGTTCCTG
ATCCTGGCGC AGATCATCAT CTTCCTCCTT GGCTGGCCGC TGGAATGGTC GGAGATCATC
ATCATCTTCG TGCCGATCTT CCTGCCGCTG CTTGCGCATT TCGACGTCGA CCCGCTGTTC
TTCGGCATCC TCGTGGCGCT GAACCTGCAG ACATCATTCC TCACCCCGCC CATGGCGATG
TCCGCCTATT ACCTCAAGGG CATCGCCCCA CCGCAGGTGA GGCTGACGCA GATTTTCGCG
GGGTGCATGC CGTTCCTGGT GATGGTCATT CTTTCCATGA TCATCGTCTA CATCTTCCCC
GGCACCGTCT ACACCCTGCC GGAGCTGGTC TATGGCCGCT AA
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| Protein sequence | MTDPQIAIMM LGIFILCIFL GFPIAFTLMA LGVGFGYYAY FDASRMWRSY NRAVEDGADS
WTLIQTWIDG FFNNRIFDLF VNQTYSVMAN EVLTAVPLFL FMGYVVERAN IVDKLFSTLY
IAARRVPGAM AVAALITCTL FATATGIVGA VVTLMGLLAF PAMLKARYDT SFASGVICAG
GTLGILIPPS IMLIVYAAAS GVSIVRLYAG ALLPGLLLAG LYLVYVIGRA ILQPSVAPKP
SKEDVGDTPI GTLLFMIVTS FLPLAFLILA VLGSILFGLA TPTEAASAGA LGGLILAVAY
RALTWQRLRE SVYLTMKTTA MVCWLFVGSW VFSSVFSYLG GEGLIRDFVT GLDMSPIMFL
ILAQIIIFLL GWPLEWSEII IIFVPIFLPL LAHFDVDPLF FGILVALNLQ TSFLTPPMAM
SAYYLKGIAP PQVRLTQIFA GCMPFLVMVI LSMIIVYIFP GTVYTLPELV YGR
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