| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0317 |
|---|
| Symbol | |
|---|
| ID | 4182917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 352289 |
|---|
| End bp | 354607 |
|---|
| Gene Length | 2319 bp |
|---|
| Protein Length | 772 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638066198 |
|---|
| Product | RNA binding S1 |
|---|
| Protein accession | YP_672886 |
|---|
| Protein GI | 110632678 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2183] Transcriptional accessory protein |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.499934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAG ACATCAATCG TATCGCTTCC CTCATCGCAG CCGAGATCGT GGCCAGGGCC
GAGCAGGCCC AGGCGGCGAT TGCATTGCTG GACGAGGGGG CGACCGTTCC CTTCATCGCG
CGCTACCGTA AGGAAGTGAC CGGGGGGCTG GACGATACCC AGTTGCGCCT GCTGTCCGAG
CGCCTGACCT ATCTGCGCGA GTTTGACCAG CGGCGCGAGG CGATCCTCTC CTCGATTCGG
GAGCAAGGCA AGCTTACGCC CGAACTGGAA GCAAAGATCG CGGCCGCCAG CACCAAGGCC
GAACTGGAGG ACATTTATCT TCCCTACAAG CCCAAGCGCC GCACCAAGGC GGAAATCGCG
CGGGAGCGCG GGCTTGGGCC GCTTGCCGAA GCGATCCTGG CGGATCGAGC CGCTGTGCCA
CGAGAATTGG CGCAAGCCTA CGTCACGGAT GAGGTGCCGG ATGTGAAGGC AGCCGTTGAA
GGCGCGCGCG ATATCCTTGC AGAGCAGTTT TCGGAGAACG CCGACCTTGT CGGCCGGCTT
CGTACATATA TGAAGGAGAA AGCCTTCCTG CGCTCACGCG TGGTGGAGGG CAAGGAAGAG
GCCGGCGCGA AATTCTCCGA CTATTTCGAC CATGTGGAGC GCTGGGCGGG CGTGCCCAGC
CACCGGGCAC TGGCCATGCT TCGCGGGCGA AACGAGGATG TGCTTTCGCT CGATATCGAA
GTCGACGCCG ACGACCCCTC GCCGGTAAAG CCGGTCGTTC GCATGGTCGC CGCTGCCTAC
CGGATCGGCG ACGCGCTTCC GGGCGACCGG TGGCTTATGG AAGTCGCGGG CTGGACCTGG
CGCGTGAAGC TTTCATTGCA TCTGTCGCTC GACCTCATGC GGGACCTGCG GGAGAGGTCG
GAAGAAGAGG CAATTCACGT CTTCGCTCGC AATCTGAAAG ACCTGCTGCT TGCTGCGCCC
GCAGGCTCGC GTCCGACCAT GGGGCTCGAT CCGGGTATCC GCACGGGTGT CAAGGTCGCC
GTCGTTGACG GTACGGGAAA GCTGGTGGCG ACCACGACCG TCTACCCGTT CCCGCCCCGC
AATGATGTGC GGGGCGCGCA AACCGAACTC GCCGCCCTCA TTCGCAAGCA TCAGGTCGAA
CTCATTGCCA TCGGCAACGG CACCGCCAGC CGGGAAACGG ACAAGCTGGT TGCGGACATG
CTCTCCGACA TGCCGCCGCC CAAGCCCATC AAGGTGGTGG TCTCCGAAGC GGGCGCTTCC
GTCTATTCCG CTTCCGAGAC CGCCGCGGCG GAATTCCCGG AGCTCGACGT GTCACTGCGC
GGCGCCGTAT CGATCGCCCG CCGATTACAG GATCCCCTCG CCGAACTCGT CAAGATCGAG
CCGAAATCGA TCGGTGTCGG GCAATACCAG CACGATGTCG ACCAATACCG GCTGGCACGC
TCGCTCGACG CGGTGGTGGA GGATGCGGTG AATGCCGTTG GCGTCGACCT CAACACAGCC
TCTGCGTCCC TGCTTGCCCG CGTCTCGGGC CTTGGCGCTT CCCTCGCAGA AGCCATCGTC
GCGCACCGCA ACATCAACGG CCCGTATGCA AGCCGCCAGG ATCTGCTCAA GGTGGCGCGA
CTTGGACAAC GCACCTTCGA GCAATGCGCG GGCTTCCTGC GCATCACCAA TGGAACCGAA
CCGCTGGACG CTTCCGCCGT GCACCCGGAG GCTTATCATC TGGCGCGCAG GATCGTTGCC
GCCTGCGGCC GGGACGTGCG TTCACTCATG GGCGATAGCG GCGCATTGAA AGCACTCGAT
CCGCGCGTTT TCGCAGACGA GCGCTTCGGG CTTCCTACCG TCCGCGACAT CATCGCAGAG
CTGGAAAAGC CCGGCCGCGA CCCGCGGCCG GCCTTCCGCA CCGCGACCTT CGCCGACGGC
ATCGACGACA TCAAGGATCT CAAGCCCGGC ATGATGCTGG AAGGCACCGT TACGAATGTT
GCGGCCTTCG GCGCTTTTGT CGATATCGGC GTGCATCAGG ACGGGCTGGT GCATGTTTCG
CAGCTCGCAA ACCGCTTTGT TAAGGACGCG CATGAGGTGG TGAAGGCGGG TGATGTGGTG
AAGGTCCGCG TCCTTGAGGT CGACATCAAG CGCAACCGCA TCAGCCTTTC CATGCGCAGC
GACGGGGATG CAGGTTCCAG GCCGCAACAG CCGCGCGAGA GCGGCAAGCC CCTCCGCAAT
TCCCAACCGG GCAACGACCG CGGCGGAACG CGCGGGCAAA GCGGGCCGGC TCAGGGCGCT
CTCGGCGCGG CACTCGCGGA AGCGTTCAAG CGCAGGTGA
|
|---|
| Protein sequence | MATDINRIAS LIAAEIVARA EQAQAAIALL DEGATVPFIA RYRKEVTGGL DDTQLRLLSE
RLTYLREFDQ RREAILSSIR EQGKLTPELE AKIAAASTKA ELEDIYLPYK PKRRTKAEIA
RERGLGPLAE AILADRAAVP RELAQAYVTD EVPDVKAAVE GARDILAEQF SENADLVGRL
RTYMKEKAFL RSRVVEGKEE AGAKFSDYFD HVERWAGVPS HRALAMLRGR NEDVLSLDIE
VDADDPSPVK PVVRMVAAAY RIGDALPGDR WLMEVAGWTW RVKLSLHLSL DLMRDLRERS
EEEAIHVFAR NLKDLLLAAP AGSRPTMGLD PGIRTGVKVA VVDGTGKLVA TTTVYPFPPR
NDVRGAQTEL AALIRKHQVE LIAIGNGTAS RETDKLVADM LSDMPPPKPI KVVVSEAGAS
VYSASETAAA EFPELDVSLR GAVSIARRLQ DPLAELVKIE PKSIGVGQYQ HDVDQYRLAR
SLDAVVEDAV NAVGVDLNTA SASLLARVSG LGASLAEAIV AHRNINGPYA SRQDLLKVAR
LGQRTFEQCA GFLRITNGTE PLDASAVHPE AYHLARRIVA ACGRDVRSLM GDSGALKALD
PRVFADERFG LPTVRDIIAE LEKPGRDPRP AFRTATFADG IDDIKDLKPG MMLEGTVTNV
AAFGAFVDIG VHQDGLVHVS QLANRFVKDA HEVVKAGDVV KVRVLEVDIK RNRISLSMRS
DGDAGSRPQQ PRESGKPLRN SQPGNDRGGT RGQSGPAQGA LGAALAEAFK RR
|
|---|
| |