| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0271 |
|---|
| Symbol | fliR |
|---|
| ID | 4182370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 310053 |
|---|
| End bp | 310799 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638066152 |
|---|
| Product | flagellar biosynthesis protein FliR |
|---|
| Protein accession | YP_672840 |
|---|
| Protein GI | 110632632 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.130948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGA CCGCGATTCT CGCAGCCTTC CTCGCCTTTT GCCGTGTGGG GGCATGCTTC
ATGCTGATGC CGGGCCTGGG GAGCGCGCGC GTTCCCATGC AGGTAAGATT GTTCGTGGCC
GTCGGTGCAT CACTCGCGCT TCTCGCGCAT CTATGGGACG TGATTGCGCC TCATGCGTCG
GATCGCCCGG ACATCCTCCT CCTGCTCATC GGATCGGAAA TTCTGATCGG ATCGTTGATT
GGGCTCGTGG CACGGCTTTA CGTTCTGGCC CTGCAATTCA TCGGCTCGGC AATCGCGTTG
ATGACGGGCT TCGGGATGGC AGCGGGCGGA GTGGCGATCG AGGAAAACGA ACCGCAGCCT
GCCGTCGCCG CGCTCATCTC CTTCTCCGCG CTCATGTTGC TGTTCGTGCT CAACTTTCAC
CACGCCATCA TAGAAGCGTT GGTTGCCTCC TACCGGCTGG CGCCGATCGA AGCGCTGTTC
GACCCGCGAG CCGCGCTCAC GGACATTGCC GATACGCTTT CGGAAGCATT CTTTGTGATG
ATCCGGCTGG GCAGCCCGTT TGTGGCCTAT GCGATCCTGA TAAATCTCGC TTTCGGCTTC
ATCAACAAGC TGACACCGCA GATTCCCATC TATTTCATAT CGCTGCCCTT CGTCATTGCG
GGCGGGCTAC TGCTTCTTTA TTTCGGCATC GGCACTTTTC TTTCCTTGTT TGCCGATGGG
TTCTTTCCCA CAACGCTCGG CAGGTGA
|
|---|
| Protein sequence | MPETAILAAF LAFCRVGACF MLMPGLGSAR VPMQVRLFVA VGASLALLAH LWDVIAPHAS
DRPDILLLLI GSEILIGSLI GLVARLYVLA LQFIGSAIAL MTGFGMAAGG VAIEENEPQP
AVAALISFSA LMLLFVLNFH HAIIEALVAS YRLAPIEALF DPRAALTDIA DTLSEAFFVM
IRLGSPFVAY AILINLAFGF INKLTPQIPI YFISLPFVIA GGLLLLYFGI GTFLSLFADG
FFPTTLGR
|
|---|
| |