| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0260 |
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| Symbol | |
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| ID | 4182359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 300195 |
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| End bp | 300953 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638066141 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_672829 |
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| Protein GI | 110632621 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.734052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCCA CCTTCAGCCT CGAAAGCCGG AGGATCATGG TTACGGGTGC CAATACGGGC
ATCGGCCAGG GCATCGCCGT GGCCGCAGCG CGCGCCGGAG CCGAAGTACT GGGCGTCGGC
CGTTCGTCCA TGGACGAGAG CGAGAAGCTC GTGGAGGCGC AGGGGACCAG CTTCACCGCG
ATTTCGTGCG ACCTAGCAGA TCCGGCCGCC TCCAGCGCCA TGTTCGATCG GGCTTGGGAG
GAACATGGGC CCATCGACGG GCTCGTCAAC AATGCCGGCA TCATCCGCCG AGTGGATGCC
GTCGACCTCA CCGAGGCCGA CTGGGACGAC GTGATGGACA TTAATCTCAA GACGCTCTTC
ACGCTCTGCC AAGCCTTCGG CCGCAAGCTG ATTGCCGGCG GGCGGCGTGG CAAAATCGTC
AACGTCGCCT CGGTGCTTTC CTTTCAGGGC GGGATACGCG TTGCCTCCTA CACGGCTTCC
AAACACGGGG TGCTGGGTTT GACGCGGGTG CTGGCCTGCG AGTGGGCGGG AAAAGGCATT
AACGTCAACG CCGTGGCGCC CGGCTATATC GAGACGAACA ACACCGAGGC CCTGCGCAAC
GACCCGGACC GCAGCGACTC AATCCTTGCG CGCATCCCGG CCGGGCGCTG GGGCCGCCCC
GAGGACATCG GCGACGCGGC CGTTTTCCTG CTCGCGCCCG CCTCGGACTA TATGCATGGT
GCCGTTATCC CCGTCGATGG CGGCTGGCTC GCACGCTAG
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| Protein sequence | MTSTFSLESR RIMVTGANTG IGQGIAVAAA RAGAEVLGVG RSSMDESEKL VEAQGTSFTA
ISCDLADPAA SSAMFDRAWE EHGPIDGLVN NAGIIRRVDA VDLTEADWDD VMDINLKTLF
TLCQAFGRKL IAGGRRGKIV NVASVLSFQG GIRVASYTAS KHGVLGLTRV LACEWAGKGI
NVNAVAPGYI ETNNTEALRN DPDRSDSILA RIPAGRWGRP EDIGDAAVFL LAPASDYMHG
AVIPVDGGWL AR
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