| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0253 |
|---|
| Symbol | |
|---|
| ID | 4182028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 284588 |
|---|
| End bp | 286039 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638066134 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_672822 |
|---|
| Protein GI | 110632614 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGC GTCTCGACCG AACGGCGAAT GGCGGCAGGC TGGTCGACAT GGTGATGGAC
GCAGTCCGGA ACCGCATCGC CTCACGCAGC CTGTCGCCCG GCGCACGCCT TCCCTCGGTT
CGGGCCTGCG CGAAAACGCT GCAGGTTTCG AGTTCGACGG TTGTTGAAGC CTATGAACGG
CTGGTGGCCG AAGGCATCAT TCGTTCGCGC CCCGGCTCCG GATTCTATGT CACCGCACCG
CTCGCGCCGC TCTCGCTTGC CGAAATCGGA CCCAAGCTCG ACCGAGAGAT CGACCCCCTA
TGGATATCGC GCCAATCATT GGCCAGCGGG GAGGACGTGC TGAAACCAGG CTGCGGCTGG
CTCCCCGCAT CCTGGATGCC GGAGGAAGCA TTGCGCAAGG CGCTGCGCGC GCTTTCCCGC
GCCGACACTT CCACCTTGGC GGATTACGGC ACGCCGTTCG GCCTGCCTGC GCTGCGTGTG
CTGCTTGCCC GCCGAATGGC GGATCACGGA ATAGAAGCTG CGCCAGAGCA GATCATCCTC
ACCGAGTCGG GAACCCACGC TATCGACCTT CTCTGCCGTT TTCTCTTAGA GCCCGGTGAT
GCGGTGATCG TGGACGACCC CTGCTACTTC AATTTTCATG CTCTCTTGCG GGCGCATCGC
GCCAAGCCGG TCGGAGTGCC CTATACGCCG AACGGCCCCG ACATTGCTCA GTTCGCCAAA
GCCCTGGAGG AACACCGGCC ACGGCTCTAC ATCACCAATT CCGCTCTGCA GAACCCGACC
GGCGTAACGC TTTCACCCGT GACAGCCCAC AAGATCCTGA AGCTTGCGGA AGATAGCGGG
CTCACCATCA TCGAGGACGA TATCTTCGCC GATTTCGAGT GGAAGCACGC GCCGCGGCTC
GCGGCCTTCG ACGGCCTGGA ACGGGTGGTG CATATCGGGA GCTTCTCCAA GACCCTTTCG
GCCTCGATTC GGTGCGGCTT TATCGCGGCG CCCCGCCGGT GGATCGAAGA TCTCGCCGAC
CTGAAAGTAG CTACCAGTTT TGGCGGAGGG CGTCTCTCGG CCGAGCTCGT CTTGATGTTG
CTCAAAGACG GAACCTACCG CCGACACCTT GAAGCCCTGC GTACCCGCCT GGCAAGCGCG
ATGGAGGAAA CGATCACACG GCTTAAGCCC CTCGGCATAG AGCCATGGGT AAAACCTGAA
GGTGGCCTTT TTCTCTGGTG CAGGCTTCCG GAAGGAATCG ACGCAGCAGC GGTCGCGCGA
CGTGCCCTCT CCGAAAATGT CGTGCTGGCA CCCGGAAACG CCTTCAGCCT CTCACATTCG
GCGAACGGTT TCCTGCGCTT CAATGTCGCT CAGTCAAAGG ACGAGCGGAT CTATCGCGTG
CTTGAGATGG CCATGCGCGA TTACGGCGGG CTTATGGGGC AAAGACCGAG ATCGCCTTGG
GATGCACTTT GA
|
|---|
| Protein sequence | MEQRLDRTAN GGRLVDMVMD AVRNRIASRS LSPGARLPSV RACAKTLQVS SSTVVEAYER
LVAEGIIRSR PGSGFYVTAP LAPLSLAEIG PKLDREIDPL WISRQSLASG EDVLKPGCGW
LPASWMPEEA LRKALRALSR ADTSTLADYG TPFGLPALRV LLARRMADHG IEAAPEQIIL
TESGTHAIDL LCRFLLEPGD AVIVDDPCYF NFHALLRAHR AKPVGVPYTP NGPDIAQFAK
ALEEHRPRLY ITNSALQNPT GVTLSPVTAH KILKLAEDSG LTIIEDDIFA DFEWKHAPRL
AAFDGLERVV HIGSFSKTLS ASIRCGFIAA PRRWIEDLAD LKVATSFGGG RLSAELVLML
LKDGTYRRHL EALRTRLASA MEETITRLKP LGIEPWVKPE GGLFLWCRLP EGIDAAAVAR
RALSENVVLA PGNAFSLSHS ANGFLRFNVA QSKDERIYRV LEMAMRDYGG LMGQRPRSPW
DAL
|
|---|
| |