| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0190 |
|---|
| Symbol | hisD |
|---|
| ID | 4179751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 232277 |
|---|
| End bp | 233569 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638066071 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_672760 |
|---|
| Protein GI | 110632552 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGA GACTTTCCAC CGCCGAGAGG GACTTTGAAA CGGCTTTCGC CGCCTTCTTG
TCGACCAAAC GCGAGGTTTC CGAGGAAGTA GACACCGCCG TGCGGGAGAT TATCGCCCGC
GTGCGGGCTG AAGGCGATTC AGCCGTGGCT GACTATACCA GGCGGTTCGA TCGTTTTGAT
CCTGCGCAGA TCCAAATGCG CGTTTCGCGC GAGGAGATCG AGGCGGCATA CGGGAAGACG
GATCCCGAGA CGCTTGAAGC CTTGAAGCTC GCGCAGGACC GTATCGAGGC GCACCACCGC
CGCCAGCTTC CTGCCGATGC GCGCTACACC GATCCGCTCG GGGTGGAACT CGGCTGGCGA
TGGACGCCGA TTACCGCCGT GGGCCTTTAT GTGCCTGGCG GGCTCGCCAG CTATCCAAGC
TCGGTGCTCA TGAATGCGAT ACCGGCCCGT GTGGCCGGCG TCGAGCGCGT GGTGATGACG
GTCCCCTCCC CGGACGGCGA GATCAATCCT CTTGTGCTGG TTGCGGCTGA TCTGGCGGGC
GTGAGCGAGA TCTACCGGAT CGGCGGCGCA CAGGCCGTGG CTGCGCTTGC CTATGGAACG
GAGAGCATCG CCCCCGTCTA CAAGATCGTC GGCCCAGGAA ATGCCTATGT AGCCGCCGCA
AAGCGGCAGG TCTTCGGACA GGTCGGTATC GATATGATCG CCGGCCCCTC CGAAGTGCTG
GTCGTCGCGG ACCGTGACAA CGATCCTGAC TGGATCGCGG CCGATCTTCT GGCCCAGGCT
GAACATGATG CAGCGGCGCA GTCGATCCTC ATGACGGACG ATCCAAACTT CGCTGAAGCG
GTGTCCGATG CCGTCGAGCG GCAGCTTACG CGGCTTTCCC GGTCGGAAAT CGCGGGCGCG
AGCTGGCGTG ATTTCGGGGC AGTCATTCTC GTCCGCAGCT TCGAGGAAGT CCCTCAACTC
GTTGATCGGA TCGCACCGGA GCATCTGGAG CTGGCGACGG AGAATGCAGA AGTGCTGCTT
TCGCGTATCC GCAATGCGGG GGCGGCCTTT ATCGGCCGCC ACACGCCTGA GGTCATCGGG
GACTATGTGG GCGGATCCAA CCACGTATTG CCGACGGCCC GCTCAGCACG CTTTTCCTCA
GGCCTTTCCG TGCTCGACTT CATGAAGCGC ATGTCGATAC TTCGGCTCGG CGCGGATCAG
CTGCGGGTAC TGGGCCCGGC CGCCATTGCT CTCGCGAAGG CTGAAGGCCT GGAGGCGCAT
GGCCGTTCCG TCTCGATACG GCTCAATACC TAG
|
|---|
| Protein sequence | MPMRLSTAER DFETAFAAFL STKREVSEEV DTAVREIIAR VRAEGDSAVA DYTRRFDRFD
PAQIQMRVSR EEIEAAYGKT DPETLEALKL AQDRIEAHHR RQLPADARYT DPLGVELGWR
WTPITAVGLY VPGGLASYPS SVLMNAIPAR VAGVERVVMT VPSPDGEINP LVLVAADLAG
VSEIYRIGGA QAVAALAYGT ESIAPVYKIV GPGNAYVAAA KRQVFGQVGI DMIAGPSEVL
VVADRDNDPD WIAADLLAQA EHDAAAQSIL MTDDPNFAEA VSDAVERQLT RLSRSEIAGA
SWRDFGAVIL VRSFEEVPQL VDRIAPEHLE LATENAEVLL SRIRNAGAAF IGRHTPEVIG
DYVGGSNHVL PTARSARFSS GLSVLDFMKR MSILRLGADQ LRVLGPAAIA LAKAEGLEAH
GRSVSIRLNT
|
|---|
| |