| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0183 |
|---|
| Symbol | |
|---|
| ID | 4179744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 228538 |
|---|
| End bp | 229497 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638066064 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_672753 |
|---|
| Protein GI | 110632545 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCGC CGCTCGATCT CGACCAGCTT GCGACCTTTA TCGCCATTGC GGACACGGGA
AGCTTCACGC GAGCGGCGGA AGAGGTTCAT CGAACACAAT CAGCAGTGTC CATGCAGATG
CGGCGCCTCG AAGAGCGGGT AGGGAAGCCG CTCTTCGAGA AAGACGGCCG TTCGAACCGG
CTGACCGACG ATGGCGAGCG GCTGCTCCTC TACGCCCGGA GGCTCCTGCG CCTCAATCGC
GAAACGCTGG CTGCCTTCGA TGACGACAGC CTTGAGGGAC ATGTGCGGAT CGGCATGCCC
GATGATTATG CCGAGCGTTT CCTGCCGGAG ATTATGGCCC GCTTCTCCCA CTCCAACCCG
CGTGTGGAGA TGTCGGTTCT TTGCGAGCCG ACTGCCAACC TGGTGCACCA CGTCCGGCAA
GGCAATGTGG ATCTTGCCCT GGTGACGGAT CAGGAAGGGG CAGAGACAGT GCGGCGCGAG
CCGCTCTTGT GGGTCGGTTC GGCCAATCAC TCCACCCATG AGCGTGAAGT GTTGCCAATG
GCTTTTGGAC GGCCAACCTG CAATTGGCGA CGGCTTGCCT GCGATACGTT GCGCGAAATC
AACCGCGATT ATCGAATCCT TTTTACAAGC TTCTCGGCAA CCGTGATCAC CGCTGCGGTT
CTGTCTGGAG CGGCGATCTC CGTCCTTCCG GAATGCACAC TCAGACCCGG AATGCGGATT
CTCGCGGAAA AGGACGGCTT CCCAAAGCTG CCGGACTGCC ATATCGGCAT CATGCGAGGA
CGCACGAACC AGACCGAGCT CGTGGACGCG CTTGCACGCC ACATTTCGGA AAGCCTGGAC
AACATCTCCA TGCCGCTTTC CGTGGTGGAG GAGACGGAAG GCCTCGATTT TACCGCCTTC
TCGCATCGCA TGAAACGGGG TAAGCGCTTG CGACCCAGCC ACATGCTACC GGGGTGGTGA
|
|---|
| Protein sequence | MSAPLDLDQL ATFIAIADTG SFTRAAEEVH RTQSAVSMQM RRLEERVGKP LFEKDGRSNR
LTDDGERLLL YARRLLRLNR ETLAAFDDDS LEGHVRIGMP DDYAERFLPE IMARFSHSNP
RVEMSVLCEP TANLVHHVRQ GNVDLALVTD QEGAETVRRE PLLWVGSANH STHEREVLPM
AFGRPTCNWR RLACDTLREI NRDYRILFTS FSATVITAAV LSGAAISVLP ECTLRPGMRI
LAEKDGFPKL PDCHIGIMRG RTNQTELVDA LARHISESLD NISMPLSVVE ETEGLDFTAF
SHRMKRGKRL RPSHMLPGW
|
|---|
| |