| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0178 |
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| Symbol | |
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| ID | 4179739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 221714 |
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| End bp | 224389 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638066059 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_672748 |
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| Protein GI | 110632540 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0415874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAA AAACGAAAAA CGTGACGGGA GAACAAGCTC CACTTTCCGC AGACGATCTG
CAGGATCTTG TCGCCTCAAC TGATACCGGT GCTCGGGAGC CCTCCGGTAT CGCAGGCTAT
ATCATTGCCG GCGTGGCGCT CTGCTGGTCG CTGTTTCAAC TCTATATCGC TTCGCCGGTG
CCGTTCTCTC TTTCCTCGCT GACGGGTCTG CCCCTCGTTT TCAACGATAC GCAGATACGC
TCGGTGCACC TCGCTTTTGG CCTTCTGCTT GCGTTCCTGG CCTATCCTGC CTTTTCGAGC
AGCCCGCGCG ATCGCATCCC TGTGATCGAC TGGATCCTGG CGATAGCGGC TGCATTCTGT
GCTCTTTACA TCTTTATCTT CTATCGCGAG CTTTCCGGCA GGCCGGGCGC ATCCATCACC
CGTGATTTGG TGGCCGCCGG GATCGGCATG GTCCTGCTTC TGGAAGCAAC ACGACGCGCG
TTAGGTCCCC CCCTCATGGT GGTGGCCATT ATCTTCCTGG CCTATGTCTT CTTCGGTTCT
TCAACCGTTG TTCCGGATGT CCTGAGATGG GGCGGCGCCT CGTTTTCGCG CGCCATGGAC
CAGATGTGGC TCACGACCGG CGGCGTTTTC GGCGTTGCCA TCGGGGTCTC GGCCTCGTTT
GTCTTCCTTT TTGTGCTGTT CGGCTCGATG TTGGACAAGG CCGGGGCAGG CAACTTCTTC
ATCAAACTCG CCTTCGCATT TCTCGGTCAT TTGCGCGGCG GTCCGGCGAA GGCTTCGGTC
CTTTCCTCAT TGATGACCGG AATGATTTCC GGCTCGTCCA TCGCGAATGT GGTCACGACC
GGCACCTTCA CCATTCCTCT CATGCGCCGT ATCGGCTATT CCGCCGAGAA GGCCGGCGCG
ATCGAGGTGG CAAGCTCGGT CAACGGGCAG ATAATGCCGC CGGTCATGGG CGCGGCCGCT
TTCTTGATGG TCGAATATGT CGGCATCCCC TATTCGGAGG TCGTCCGGCA CGCCATCCTT
CCGGCACTCA TCACCTATAT ATCGCTGCTT TACATCGTGC ATCTGGAAGC GGTGAAGAAG
GACATGCCGG TGCTGCAGCG CCGCCAGAGC GGCCCGTTCT TCATGTCTCT GGTGCGCTCC
CTTATCGTCT TCCTGTCCTT CGTTCTCGTC CTGATCGGCA CCTACTGGCT GGTCAAGCTG
GTAAGGATGG CTCTGCCGGG ACTTTCGACG GAGATCTTGA TCTTCCTTCT GCTGGGGGCG
TATGTGGCCG CGCTTTGGTT CGCGGCCAAG GTACCCGACC TTGAACTGGA CGATCCCAAC
GCACCGGTGG TGAAGATTCC CAGCGCCCTG GAGGTTGCCA AAACCGGCTT CCACTTCCTT
TTGCCGCTCT TCGTACTTGT CTGGATGTTG CTGGTGGAGC ACCGCTCGCC GGGGCTTTCG
GCCTTCTACG CGGTCCTGCT GCTGATTGTG ATCATGCTCA CCCAGAAGCC GTTGAAGGCG
TGGTTCCGCC GGTTGCAGAC GCCGGAAATC CGTGCCGCTG CTCTGGAAGG CTGGTACGAT
CTCGGCAATG GTATGATCCT CGGCGCGCGC AACATGATCG GCATCGCCTG CGCGACCGCC
GCGGCGGGCA TCGTCGTCGG CACCGTCACG CTCACGGGCG TCGGCCAGGT CATGGCCCAG
TTCGTCGAGC TGCTTTCGGG CGGCAACATC TATCTCATCC TCATCTTCAC CGCCATCATC
AGCCTGATCC TGGGCATGGG GTTGCCGACG ACGGCGAACT ATATCGTCGT CTCCACCTTG
ATGGCGCCGG TGATCGTGAA CCTTGGCGCC GCGAACGGCT ATCTCATCCC GCTGATCGCG
GCCCACATGT TCGTCTTCTA TTTCGGCCTG ATGGCTGATG TGACGCCGCC CGTTGGGCTT
GCTTCCTTCG CCGCATCCGC CATTTCAAGG GCCGACCCGC TGCGCACCGG CGTTCAGGCG
TTCTTCTACG AGATGCGCAC CGCGCTCTTG CCGTTCGTCT TTGTATTCAA TCAGGAACTC
CTGTTGATGG ACGTGACGCT GCTGGGCGCG ATCTTCGTGT TTATGAAGTC TACAATTGCG
ATGCTGCTCT TTGCCGCCGC GACGCAAGGC TTTTTCATGA CCAAGTCGCG CCTATGGGAA
TCGGCAGCGC TTCTGCTCGT TACCGCCGCG CTCCTCCGGC CGGGCTTCTT TCTCGATTTC
GTGCAGCCGC CCTATGAGCA AATCGAGCCA CAGCGGCTTT TCGAGGTCGT GGAGCAGCTT
CCGTCTGATT CAGAGGTGCG TGTGCTGATC AGGGGCCCGA GCTTTGAAGA TCCTGACCAG
ACATTGGAGC GCACGATGGC CTTCAATCTC GGAGAGGCAG GGCAGGATGG GCAGATGCGT
TTCGAGGAGG CGACAGACCT GCCGGCGCGC ATTGAAAGCG GCTCGGTCAT TCTTGATGAG
CCCCTGGACC TGAACAGCCT GTCCGGCCGC ACCCTGTCCA ATATGGACTT CTATGCTGAT
GAGCCGGTGC AGGTCGTGGC TTTCGAAGTG CCCGCGGAAC GCATGCCGAG GGAGGTCTTC
TATATACCCG CCGTGTTTAT ACTGGGACTG GTCATGTTCC TGCAGCGCCG GCGCGGCGGT
ACGCTCGCCG GCAATCCTGT CCCGCAACCC GCCTGA
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| Protein sequence | MAEKTKNVTG EQAPLSADDL QDLVASTDTG AREPSGIAGY IIAGVALCWS LFQLYIASPV
PFSLSSLTGL PLVFNDTQIR SVHLAFGLLL AFLAYPAFSS SPRDRIPVID WILAIAAAFC
ALYIFIFYRE LSGRPGASIT RDLVAAGIGM VLLLEATRRA LGPPLMVVAI IFLAYVFFGS
STVVPDVLRW GGASFSRAMD QMWLTTGGVF GVAIGVSASF VFLFVLFGSM LDKAGAGNFF
IKLAFAFLGH LRGGPAKASV LSSLMTGMIS GSSIANVVTT GTFTIPLMRR IGYSAEKAGA
IEVASSVNGQ IMPPVMGAAA FLMVEYVGIP YSEVVRHAIL PALITYISLL YIVHLEAVKK
DMPVLQRRQS GPFFMSLVRS LIVFLSFVLV LIGTYWLVKL VRMALPGLST EILIFLLLGA
YVAALWFAAK VPDLELDDPN APVVKIPSAL EVAKTGFHFL LPLFVLVWML LVEHRSPGLS
AFYAVLLLIV IMLTQKPLKA WFRRLQTPEI RAAALEGWYD LGNGMILGAR NMIGIACATA
AAGIVVGTVT LTGVGQVMAQ FVELLSGGNI YLILIFTAII SLILGMGLPT TANYIVVSTL
MAPVIVNLGA ANGYLIPLIA AHMFVFYFGL MADVTPPVGL ASFAASAISR ADPLRTGVQA
FFYEMRTALL PFVFVFNQEL LLMDVTLLGA IFVFMKSTIA MLLFAAATQG FFMTKSRLWE
SAALLLVTAA LLRPGFFLDF VQPPYEQIEP QRLFEVVEQL PSDSEVRVLI RGPSFEDPDQ
TLERTMAFNL GEAGQDGQMR FEEATDLPAR IESGSVILDE PLDLNSLSGR TLSNMDFYAD
EPVQVVAFEV PAERMPREVF YIPAVFILGL VMFLQRRRGG TLAGNPVPQP A
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