Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0130 |
Symbol | |
ID | 4179593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 159214 |
End bp | 160944 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638066010 |
Product | ABC transporter related |
Protein accession | YP_672700 |
Protein GI | 110632492 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGAGG AATTCGTCCG CCTTTCCGAT GTTACCAAGC GGTTCGGGAG CGCACCCCCC GCTCTCGACG CGGTGTCCGG CTCGATCCGC GGCGGTGAGA TCACCGGCCT GATCGGGCCG GACGGCGCCG GCAAGACGAC ACTCATCCGG CTCATGACCG GCCTGATCCT GCCGGACAGC GGCGTGATCG AGGTGCTGGG CTTCGATACG CAGAAAAATC CCGCGGGCAT CCAGGCTTCG ATCGGCTACA TGCCGCAACG CTTCGGCCTC TATGAGGATC TTTCCGTGCA GGAGAATCTC GATCTCTATG CCGACCTGCG CGGCCTGCCG CTGGCGGAAC GCCCAGCCGT CTTCGACGAG CTGTTGACCT TCACCGACCT TAAGCGCTTC ACCGGCCGCC TTGCCGGCAA GCTTTCCGGC GGCATGAAGC AGAAGCTCGG CCTCGCCTGC GCGCTCCTCA AAAAACCCCG CCTCCTGCTT CTCGACGAGC CGGGCGTCGG TGTCGACCCG ATCTCGCGCC GTGACCTCTG GACCATGGTC GAGGACCTGA CCAGGGAGGG CATCGGCGTG CTCTGGTCCA CAGCCTATCT TGACGAAGCC GAAGCCTGCG ACCGCGTTCT CCTCCTCAAT GAAGGAAAAC TCCTCTTCAC CGGCACGCCT TCCGGCCTCA CTGGTCGGGT GGACGGCCGC GTTTTCAAGC TTGGGGGCAT CGAGGGCCGG CGGCGGCCGA TCCTCACCAA AGTGCTTGAC CAGAAAGGCG TCGTGGACGG CGTGATCCAG GGCGAGGCGA TCCGGCTGGT GCTCGACGCG CCGGAGCCAC AGGGGTGGAA GGCTACGGAC GTCGCCGGGC GGGCCGCTGC GCTGAGCCCC GCCGCGCCGC GCTTTGAGGA TGCCTTCGTG GATATGCTCG GCGGGGGACC GGGCGGAGAG TCCAAGCTCG CCGATGCCGC CATTCCCCGT GACCAGAACG AAGGCCGCGC CGTGATCGAG GCGCGCGGCC TCACCAAGCG CTTCGGCGAC TTCACGGCGG CGAGCGACAT CACCTTCTCA ATCCCGCGCG GGCAGATTTT CGGCCTCCTC GGCCCCAATG GCGCGGGGAA ATCGACCACG TTCAAAATGC TCTGCGGGCT TTTGAAGCCC ACCGAGGGCG AGGGCCGCGT CGCCGGCTTC GACCTGCGCC ACGACACGGC GGAAGCACGC AACCGGCTCG GCTATATGGC GCAGAAATTC TCGCTCTATG GCGACCTCAG CGTCGCCCAG AACCTCGCCT TCTTCGCCGG CGTCTATGGC CTCAGCGGCG CGCGCAAGCG CGAGCGCATT ACGCTTATGA CCGACATCTT CGATTTCAGA TCCATCCTCG GCATGTCCGC AAAAGACTTG CCGCTGGGTT TGAAGCAGCG GCTCGCGCTC GCCTGTGCCG TGCTGCATGA GCCCGAAGCC CTTTTCCTCG ATGAGCCGAC CTCCGGTGTC GATCCCATAA CCCGGCGCGA GTTTTGGACC CACATCAACG GCCTGGTCGA GAAGGGCGTC ACTGTCCTCG TCACCACCCA CTTCATGGAC GAGGCGGAAT ATTGCGATCG TATTTCGCTC ATCTATCGCG GCCGCTCCAT CGCGCTCGGC TCCCCGGACG AATTGAAGGC GAGCGTCGCG GGCAAGGACA TCCCCGACCC GACGATGGAG GACGCCTTCA TCGCGCTGGT GCAGAACTCC GATCTGGCGG AGACCGCATG A
|
Protein sequence | MGEEFVRLSD VTKRFGSAPP ALDAVSGSIR GGEITGLIGP DGAGKTTLIR LMTGLILPDS GVIEVLGFDT QKNPAGIQAS IGYMPQRFGL YEDLSVQENL DLYADLRGLP LAERPAVFDE LLTFTDLKRF TGRLAGKLSG GMKQKLGLAC ALLKKPRLLL LDEPGVGVDP ISRRDLWTMV EDLTREGIGV LWSTAYLDEA EACDRVLLLN EGKLLFTGTP SGLTGRVDGR VFKLGGIEGR RRPILTKVLD QKGVVDGVIQ GEAIRLVLDA PEPQGWKATD VAGRAAALSP AAPRFEDAFV DMLGGGPGGE SKLADAAIPR DQNEGRAVIE ARGLTKRFGD FTAASDITFS IPRGQIFGLL GPNGAGKSTT FKMLCGLLKP TEGEGRVAGF DLRHDTAEAR NRLGYMAQKF SLYGDLSVAQ NLAFFAGVYG LSGARKRERI TLMTDIFDFR SILGMSAKDL PLGLKQRLAL ACAVLHEPEA LFLDEPTSGV DPITRREFWT HINGLVEKGV TVLVTTHFMD EAEYCDRISL IYRGRSIALG SPDELKASVA GKDIPDPTME DAFIALVQNS DLAETA
|
| |