Gene Meso_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0130 
Symbol 
ID4179593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp159214 
End bp160944 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content65% 
IMG OID638066010 
ProductABC transporter related 
Protein accessionYP_672700 
Protein GI110632492 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAGG AATTCGTCCG CCTTTCCGAT GTTACCAAGC GGTTCGGGAG CGCACCCCCC 
GCTCTCGACG CGGTGTCCGG CTCGATCCGC GGCGGTGAGA TCACCGGCCT GATCGGGCCG
GACGGCGCCG GCAAGACGAC ACTCATCCGG CTCATGACCG GCCTGATCCT GCCGGACAGC
GGCGTGATCG AGGTGCTGGG CTTCGATACG CAGAAAAATC CCGCGGGCAT CCAGGCTTCG
ATCGGCTACA TGCCGCAACG CTTCGGCCTC TATGAGGATC TTTCCGTGCA GGAGAATCTC
GATCTCTATG CCGACCTGCG CGGCCTGCCG CTGGCGGAAC GCCCAGCCGT CTTCGACGAG
CTGTTGACCT TCACCGACCT TAAGCGCTTC ACCGGCCGCC TTGCCGGCAA GCTTTCCGGC
GGCATGAAGC AGAAGCTCGG CCTCGCCTGC GCGCTCCTCA AAAAACCCCG CCTCCTGCTT
CTCGACGAGC CGGGCGTCGG TGTCGACCCG ATCTCGCGCC GTGACCTCTG GACCATGGTC
GAGGACCTGA CCAGGGAGGG CATCGGCGTG CTCTGGTCCA CAGCCTATCT TGACGAAGCC
GAAGCCTGCG ACCGCGTTCT CCTCCTCAAT GAAGGAAAAC TCCTCTTCAC CGGCACGCCT
TCCGGCCTCA CTGGTCGGGT GGACGGCCGC GTTTTCAAGC TTGGGGGCAT CGAGGGCCGG
CGGCGGCCGA TCCTCACCAA AGTGCTTGAC CAGAAAGGCG TCGTGGACGG CGTGATCCAG
GGCGAGGCGA TCCGGCTGGT GCTCGACGCG CCGGAGCCAC AGGGGTGGAA GGCTACGGAC
GTCGCCGGGC GGGCCGCTGC GCTGAGCCCC GCCGCGCCGC GCTTTGAGGA TGCCTTCGTG
GATATGCTCG GCGGGGGACC GGGCGGAGAG TCCAAGCTCG CCGATGCCGC CATTCCCCGT
GACCAGAACG AAGGCCGCGC CGTGATCGAG GCGCGCGGCC TCACCAAGCG CTTCGGCGAC
TTCACGGCGG CGAGCGACAT CACCTTCTCA ATCCCGCGCG GGCAGATTTT CGGCCTCCTC
GGCCCCAATG GCGCGGGGAA ATCGACCACG TTCAAAATGC TCTGCGGGCT TTTGAAGCCC
ACCGAGGGCG AGGGCCGCGT CGCCGGCTTC GACCTGCGCC ACGACACGGC GGAAGCACGC
AACCGGCTCG GCTATATGGC GCAGAAATTC TCGCTCTATG GCGACCTCAG CGTCGCCCAG
AACCTCGCCT TCTTCGCCGG CGTCTATGGC CTCAGCGGCG CGCGCAAGCG CGAGCGCATT
ACGCTTATGA CCGACATCTT CGATTTCAGA TCCATCCTCG GCATGTCCGC AAAAGACTTG
CCGCTGGGTT TGAAGCAGCG GCTCGCGCTC GCCTGTGCCG TGCTGCATGA GCCCGAAGCC
CTTTTCCTCG ATGAGCCGAC CTCCGGTGTC GATCCCATAA CCCGGCGCGA GTTTTGGACC
CACATCAACG GCCTGGTCGA GAAGGGCGTC ACTGTCCTCG TCACCACCCA CTTCATGGAC
GAGGCGGAAT ATTGCGATCG TATTTCGCTC ATCTATCGCG GCCGCTCCAT CGCGCTCGGC
TCCCCGGACG AATTGAAGGC GAGCGTCGCG GGCAAGGACA TCCCCGACCC GACGATGGAG
GACGCCTTCA TCGCGCTGGT GCAGAACTCC GATCTGGCGG AGACCGCATG A
 
Protein sequence
MGEEFVRLSD VTKRFGSAPP ALDAVSGSIR GGEITGLIGP DGAGKTTLIR LMTGLILPDS 
GVIEVLGFDT QKNPAGIQAS IGYMPQRFGL YEDLSVQENL DLYADLRGLP LAERPAVFDE
LLTFTDLKRF TGRLAGKLSG GMKQKLGLAC ALLKKPRLLL LDEPGVGVDP ISRRDLWTMV
EDLTREGIGV LWSTAYLDEA EACDRVLLLN EGKLLFTGTP SGLTGRVDGR VFKLGGIEGR
RRPILTKVLD QKGVVDGVIQ GEAIRLVLDA PEPQGWKATD VAGRAAALSP AAPRFEDAFV
DMLGGGPGGE SKLADAAIPR DQNEGRAVIE ARGLTKRFGD FTAASDITFS IPRGQIFGLL
GPNGAGKSTT FKMLCGLLKP TEGEGRVAGF DLRHDTAEAR NRLGYMAQKF SLYGDLSVAQ
NLAFFAGVYG LSGARKRERI TLMTDIFDFR SILGMSAKDL PLGLKQRLAL ACAVLHEPEA
LFLDEPTSGV DPITRREFWT HINGLVEKGV TVLVTTHFMD EAEYCDRISL IYRGRSIALG
SPDELKASVA GKDIPDPTME DAFIALVQNS DLAETA