| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0112 |
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| Symbol | |
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| ID | 4179575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 139519 |
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| End bp | 140334 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638065992 |
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| Product | type III secretion protein SpaR/YscT/HrcT |
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| Protein accession | YP_672682 |
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| Protein GI | 110632474 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.304079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGAGG CGCTCTCATT CATTGCTCCT GATAACCGCG AATTGCTGGA TCTCCTCCTT
GCATTCTTGC TGTCGATGAC GAGGCTCAGC GGTTTTTTTG CCATCTCGCC TTTCTTTTCC
CGTAAGAGCA TGCCGCGCAT CGTCCGCTTC GGCACGATGG CGGCGATGAG CTTTCCGATC
GTATCCAGCC TGGCTGCCGA GGTTGGCACG GAAATCGCCA GGCAAGGCGG GGCGCTCCCC
TCTTATCCGG TTCTGATCGT GAAGGAACTG GCGTTGGGGC TCTTTCTAGG CACGCTCGTC
TGGTTGCCGA TCCGCGGCTT GGAACTGGCG GGCGTAATCC TCGACACGCA GCGCGGAAGC
ACGCAGGCGG AGGATTACGA TGTGGTCTTC TCCGCTCAAA CGACACCGAC GGCGATCTTC
CTCTCACAGC TTTTCGCAGG CTTCTTTTTC GCCGCGGGTG GCTTCCTGAT GGTCATGACG
ATATTTTATC AGAGCATCGC GATATGGCCG CCGATGGATC TGCTTCCCGC CTTCACGCGG
GAGACGCTTC TCCTCTTCGT CCGCTTTGCC GGCATGGTTT ACTTCACCGC ATTGGTGCTG
GTGCTGCCGA TCTCCGGCTT TATGTTGCTG AGCGACATCT GCATCGCTTT TCTGGCCCGC
TCGGCACCCA GCCTCAACGC TCTGACACTG GGCATGCCCG TTAAATCAGC GGTCCTTCTG
GTCATGCTGA TTTTCTACAT TGCCCTCCTT TATCCCAAGC TCTGGGAGAC AGTGGCCGGT
TCTTTGGTAC TGATGCAGCA GGTTCTCGGA TTATGA
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| Protein sequence | MKEALSFIAP DNRELLDLLL AFLLSMTRLS GFFAISPFFS RKSMPRIVRF GTMAAMSFPI
VSSLAAEVGT EIARQGGALP SYPVLIVKEL ALGLFLGTLV WLPIRGLELA GVILDTQRGS
TQAEDYDVVF SAQTTPTAIF LSQLFAGFFF AAGGFLMVMT IFYQSIAIWP PMDLLPAFTR
ETLLLFVRFA GMVYFTALVL VLPISGFMLL SDICIAFLAR SAPSLNALTL GMPVKSAVLL
VMLIFYIALL YPKLWETVAG SLVLMQQVLG L
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