Gene Meso_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0088 
Symbol 
ID4179551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp116662 
End bp117939 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content61% 
IMG OID638065967 
Product5-aminolevulinate synthase 
Protein accessionYP_672658 
Protein GI110632450 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01821] 5-aminolevulinic acid synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATC AGCGGTTCTT CTCCGAGGCT ATCGACCAAC TTCACGCGGA GCGGCGCTAC 
AGGGTTTTTG CGGATCTCGA GCGGATCGCA GGAGCCTTTC CGCGCGCCAT CTGGCGCGCC
GATGGAAAGG CACGTGAGAT CACTGTCTGG TGCTCGAATG ACTATCTGGG CATGGGCCAG
CATCCGGATG TGATCGCCGC CATGCAGGAG GCTGTCGGCC GGATCGGCGT GGGCGCTGGC
GGCACTCGCA ATATTTCCGG CACAAACCAC CCGCTGGTGG AACTCGAGGC GGAACTGGCC
GACTTGCATG GGAAAGAAGC CGCCCTCGTT TTCACCTCCG GTTTCGTTTC CAACGAGGCT
TCGATCTCGA CCATCGCGCG CCTCCTGCCC AATTGCCTGG TCCTTTCAGA CGAACTCAAC
CATGCCTCCA TGATCGAAGG CGTGCGCCGT TCCGGGGCAG AGAAGAAGAT TTTCCGCCAC
AACGACCTGG AGCATTTGGA AAGCCTGCTG AGGGCCGCAG AGCCCCGCCG GGCAAAGCTC
ATCGTGTTCG AGTCGGTATA TTCGATGGAT GGCGACATCG CGCCGATCGC GGAGATTGCC
GACCTTGCCG ACCGCTATAA TGCGATGACC TATATCGATG AGGTGCATGC TGTCGGCATG
TATGGTGCAC ATGGCGGCGG GATCACCGAG CGGGAAGGCC TCGCACACCG CATTGATGTG
ATCGAGGGCA CGCTGGCAAA GGCGTTTGGC GTCATCGGCG GCTATATCGC AGGGTCGGCA
TCGCTCGTCG ACGCAGTACG CTCCTACGCG CCCGGATTCA TCTTTACGAC TGCGCTGCCG
CCTGCCATCG CAGCGGCTGC CACCGCATCG ATCCGGCATC TGAAGAAATC GAACGCGGAG
CGCGAGGCGC AGCAAAGGCA GGCGCGACGG ACAACGGAGG TTTTGCGTGC GGCCGGCCTT
CATGTCATGC CGTCCGAAAC GCATATCGTG CCGGTCCTGG TCGGCGACCC CGAGCTTTGC
AAGAAAGCGA GCGACCGGCT TTTGGAAAAA CACAGCATCT ACATTCAGCC GATCAACTAT
CCCACTGTTC CGCGCGGAAC AGAGCGCCTG CGCATAACAC CCACGCCCTT CCACTCGGAC
GACCTTGTCG AGAAGCTGAG GGACGCACTG CTTGAGACCT GGCAGGCTCT CGGCATCAGC
TTCAACGAAG CGAATCCTAC GTCGGCCGCG CGGACAGATC GCATCATCCC GCTGGTGGTC
TCGAAATCAG GCGGATAG
 
Protein sequence
MDYQRFFSEA IDQLHAERRY RVFADLERIA GAFPRAIWRA DGKAREITVW CSNDYLGMGQ 
HPDVIAAMQE AVGRIGVGAG GTRNISGTNH PLVELEAELA DLHGKEAALV FTSGFVSNEA
SISTIARLLP NCLVLSDELN HASMIEGVRR SGAEKKIFRH NDLEHLESLL RAAEPRRAKL
IVFESVYSMD GDIAPIAEIA DLADRYNAMT YIDEVHAVGM YGAHGGGITE REGLAHRIDV
IEGTLAKAFG VIGGYIAGSA SLVDAVRSYA PGFIFTTALP PAIAAAATAS IRHLKKSNAE
REAQQRQARR TTEVLRAAGL HVMPSETHIV PVLVGDPELC KKASDRLLEK HSIYIQPINY
PTVPRGTERL RITPTPFHSD DLVEKLRDAL LETWQALGIS FNEANPTSAA RTDRIIPLVV
SKSGG