| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0064 |
|---|
| Symbol | |
|---|
| ID | 4179508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 87603 |
|---|
| End bp | 88457 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638065942 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_672634 |
|---|
| Protein GI | 110632426 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.080587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGC TCGAGATCGA GAACCTTTCC GTCGAGTTCG AAACCGCAAC CGGCAAGCTG
CGGGCGGTGG ACGGCATCTC GCTTTCCGTG GATGAGGGCG AGGTGCTTGC CATCGTCGGC
GAGTCCGGGT CCGGCAAATC CGTCTCAATG CTGGCCGTTA TGGGCCTCCT GCCCTGGACG
GCGACGGTGA AGGCGGACCG CATGACATTC CAGGGGCGCG ATATCCTCAG TCTCCCTTTC
AGAGAGCGCA GGCGCATCGC CGGCAACGAA ATTGCCATGA TCTTTCAGGA GCCGATCGCC
AGCCTCAATC CGTGCTTCAC CGTCGGCTTC CAGATCGAGG AAACGCTGAA GGCGCACACG
GACCTTGGCC GGGCGGACCG GAAGAAGCGG ACAATCGAGT TGCTAAAATC CGTCGGCATT
CCCGATCCGG AGGAGCGACT GAACTCCTTC CCGCACCAGA TGTCCGGCGG CCAGTCGCAG
AGGGTGATGA TCGCAATGGC GCTCGCCTGC AACCCGAAGC TGTTGATTGC CGACGAACCA
ACGACGGCGC TCGACGTGAC GATCCAAAAG CAGATTCTGG ATCTCCTGAT GGATCTGCAG
GCCAGGACAG GCATGGCGAT GATCCTGATC ACGCACGACA TGGGCGTTGT GGCGGAGACG
GCCGACCGGG TGATCGTGCA GTACAAAGGC AAGAAGATGG AGGAAGCCGA CGTGCTTTCC
CTGTTCGAGG CGCCGAACCA TCCCTACACA AAGGCGCTGC TCTCCGCCCT GCCCGAGAAT
GCAGTAGGAG ACCGCCTGCC GACCGTCTCC GATTTCGCGC TGGAAGAAGC GCCGTACACG
GGAGCTGCCT CATGA
|
|---|
| Protein sequence | MALLEIENLS VEFETATGKL RAVDGISLSV DEGEVLAIVG ESGSGKSVSM LAVMGLLPWT
ATVKADRMTF QGRDILSLPF RERRRIAGNE IAMIFQEPIA SLNPCFTVGF QIEETLKAHT
DLGRADRKKR TIELLKSVGI PDPEERLNSF PHQMSGGQSQ RVMIAMALAC NPKLLIADEP
TTALDVTIQK QILDLLMDLQ ARTGMAMILI THDMGVVAET ADRVIVQYKG KKMEEADVLS
LFEAPNHPYT KALLSALPEN AVGDRLPTVS DFALEEAPYT GAAS
|
|---|
| |