Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0032 |
Symbol | |
ID | 4179476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 38306 |
End bp | 39916 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638065909 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_672602 |
Protein GI | 110632394 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAACGCT TCGCCGAACT CCTCGACCGG CTGGTGCTGA CGCCATCGCG AAACGGCAAG CTGCGGCTCC TGACCGACTA TTTCGCAACC GTGCCCGACC CCGACCGCGG CTATGGGCTC GCTGCACTCA CCGGGGGCAT CGGCTTTCCC GCGGTGAAGC CGGCCATGCT GCGCATGCTG GTGATGGAGC GGGTCGACCC TGTGCTTTTC GGCTATTCCT ATGACTATGT GGGCGATCTT GCCGAAACCG TCTCGCTCAT CTGGCCGGCG GGCGAAAACG AGGAGGCGGA GGCGCCGTCG CTCTCGGAAG TGGTGGAGCG GCTAGCGCAG GCAAGCCGCT CCGATGCGCC GGCGGTGGTG GCCCGGCTCC TCGACCAGCT TTCTCCCTCC GGCCGCTTCG CCGCGATCAA GCTTGCCACG GGCGGCCTGC GCGTCGGCGT CTCCGCGAGG CTCACAAAGC AGGCGCTCGC CGATTTCGGC CAGGTGGATG TGCAGGAGAT CGAAGAACTC TGGCACGGGC TCTGGCCGCC CTATACCGAA CTGTTCGCCT GGCTGGAAAA GCGAGGGCCC AAGCCGGAAA ATGCCGCCAA GGCGCCGTTC CGGCCCGTCA TGCTGGCACA TGCGATCGAG GAGGCGGACT TTGCCAATCT TAAGCCTGCG GACTATGCCG CCGAATGGAA GTGGGACGGC ATTCGCGTGC AAGCCGTGGC TGAAGATGGC GTGCGCAGGC TCTATTCCCG CACGGGCGAC GATATTTCCG GCGCCTTTCC CGACCTTGCT GAGGCCATGG ATTTTGAAGC AGCCCTCGAC GGCGAGCTTC TGGTGGGCGA CCCGCGCGAG AGGACCGGCA CTTTTTCTGA CCTGCAGCAG AGGCTGAACC GCAAGAGCGT CTCGCAGAAG ATGCTCAGGG ACTATCCGGT TTTCATGCGC TGCTATGATG TCCTGTCGCT CGGCGGGCGC GATACGCGGC CGCTGGCCTA TGCGGAGCGC CGCGAGCTTC TGAAAGAGTT CCTGACCACG CTTCCACCTG ATCGCTTCGA CCTCTCGCCC GCAATTTCCT TCGAGACCTG GGAGGATCTT GACGACAAAC GCTGCAACCC GCCGCATCCC ATTATCGAAG GGGTGATGCT GAAGCGCAGG GATTCACATT ATCTGCCGGG CCGTCCGAAA GGACCTTGGT TCAAGTGGAA GCGCGATCCT TTCACGGTGG ACGCGGTTTT GATGTATGCC CAGCGCGGCC ATGGCAAGCG GTCAAGCTTT TACTCCGACT ATACGTTCGG GGTATGGGCC GGACCGGAGG AGGAGCCGAT GCTGGTGCCG GTGGGAAAAG CCTATTTCGG CTTCACCGAC GAGGAGCTGA AGCAGATTGA CAAATACGTG CGGGATAACA CGACAGAGCG TTTCGGCCCC GTGCGCGCGG TGCGCGCGGA CCGCAATCAT GGGCTCGTGC TCGAAGTGGC CTTCGAAGGC CTTGCCCGTT CCACGCGGCA CAAATCCGGC ATAGCCATGC GGTTCCCGCG CATTTCGCGC CTGCGCTGGG ATAAGCCGAG CCGAGAGGCG GACCGGATCG AAACGCTGGA GGCGATGATA CCAAAGGGCG CAGGTGCTTG A
|
Protein sequence | MERFAELLDR LVLTPSRNGK LRLLTDYFAT VPDPDRGYGL AALTGGIGFP AVKPAMLRML VMERVDPVLF GYSYDYVGDL AETVSLIWPA GENEEAEAPS LSEVVERLAQ ASRSDAPAVV ARLLDQLSPS GRFAAIKLAT GGLRVGVSAR LTKQALADFG QVDVQEIEEL WHGLWPPYTE LFAWLEKRGP KPENAAKAPF RPVMLAHAIE EADFANLKPA DYAAEWKWDG IRVQAVAEDG VRRLYSRTGD DISGAFPDLA EAMDFEAALD GELLVGDPRE RTGTFSDLQQ RLNRKSVSQK MLRDYPVFMR CYDVLSLGGR DTRPLAYAER RELLKEFLTT LPPDRFDLSP AISFETWEDL DDKRCNPPHP IIEGVMLKRR DSHYLPGRPK GPWFKWKRDP FTVDAVLMYA QRGHGKRSSF YSDYTFGVWA GPEEEPMLVP VGKAYFGFTD EELKQIDKYV RDNTTERFGP VRAVRADRNH GLVLEVAFEG LARSTRHKSG IAMRFPRISR LRWDKPSREA DRIETLEAMI PKGAGA
|
| |