Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0002 |
Symbol | |
ID | 4179426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 1712 |
End bp | 2830 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638065879 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_672572 |
Protein GI | 110632364 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.142435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTAG TCCTTGAACG TTCCAATCTT CTGAAGTCGC TCGGCCATGT TCATCGGGTG GTGGAACGGC GTAATACCAT TCCCATTCTC TCCAATGTGC TGCTTTCAGC TGATGGTGCG AGCCTGGAGA TGAAAGCGAC CGACCTCGAT CTGGAGATGA CGGAAGCAGC GCCGGCCTCC GTGGAGCAGG GAGGCGCCAC CACCGTGCCT GCGCATCTGC TCTACGATAT CGTCCGCAAG CTGCCGGACG GTGCTGAGGT GATGTTGAAG GTGGATGAGA ACGGCCAGAC CATGTCGGTC ATTTCGGGCC GTTCCACCTT CCGCTTGCAA TGCCTGCCCA AGGCGGATTT CCCGGCCCTT ACGGCTGGCC AGTTTTCGCA TATTTTCCGC ATGGAATCCG CCGTCCTGCG CAGCCTGGTG GAGAAGACCC AGTTCGCCAT CTCGACCGAG GAGACGCGTT ATTATTTGAA CGGCATCTTC CTTCACACGC TTGAATCGGA TGGAGCGCTC AAGCTTCGGG CCGTGGCAAC CGATGGCCAC CGCCTTGCGC GGGCGGAGAT CGAGGCGCCC GCCGGTTCGG AAGGGATGCC CGGCATCATT GTACCGCGCA AAACCGTTGG CGAATTGCAG AAGCTGGTGG ACGATCCGGA TGTTGCCGTC ACTGTGGAGC TTTCGGACAC GAAAATCCGC TTCACAATTG GCAGTGTTGT GCTTACGTCC AAGCTGATCG ACGGCACGTT CCCCGATTAT CAGCGCGTCA TCCCGGTAGG CAACGACAAG GAACTGCTCA TCGACAGGCA GAGCTTCTCG GCGGCGGTCG ATCGTGTCTC CACCGTCTCC TCGGAGCGCG GACGGGCGGT GAAACTTTCC ATTTCGGACG GTCAGGTGAC CTTTACGGTC AACAATCCGG ATTCGGGCAG CGCGACGGAA GAAATACCTG CGGGCTATAA CGCGGATCCC ATCGAAATCG GTTTCAACGC GCGCTACCTC TTGGACGTTG CAGCGCAACT GTCGGGCAGT GAAGCGAAGT TTCTCCTGGC CGACGCCGGC TCGCCGACGC TCATCCAGGA TACGTCCGAC GAGCGCGTGC TTTACGTCCT GATGCCGATG CGGGTGTGA
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Protein sequence | MRVVLERSNL LKSLGHVHRV VERRNTIPIL SNVLLSADGA SLEMKATDLD LEMTEAAPAS VEQGGATTVP AHLLYDIVRK LPDGAEVMLK VDENGQTMSV ISGRSTFRLQ CLPKADFPAL TAGQFSHIFR MESAVLRSLV EKTQFAISTE ETRYYLNGIF LHTLESDGAL KLRAVATDGH RLARAEIEAP AGSEGMPGII VPRKTVGELQ KLVDDPDVAV TVELSDTKIR FTIGSVVLTS KLIDGTFPDY QRVIPVGNDK ELLIDRQSFS AAVDRVSTVS SERGRAVKLS ISDGQVTFTV NNPDSGSATE EIPAGYNADP IEIGFNARYL LDVAAQLSGS EAKFLLADAG SPTLIQDTSD ERVLYVLMPM RV
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