Gene Meso_4609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4609 
Symbol 
ID4178736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008244 
Strand
Start bp44101 
End bp44790 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content51% 
IMG OID638059489 
ProductXRE family transcriptional regulator 
Protein accessionYP_666211 
Protein GI110347395 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGAA TAAATGCATT GAATGTACAG ACCTCGGATG AGAAGGGCCC AGCAAGCCCC 
TTCTCCGTGG ATCAATTGCG TATTGGACCA AGGCTTAAGG CTGCTCGCCG TTTGCAGCGC
ATTACGTTAG CTGAACTATC CAAAAGAACT TCGATTTCTA TTAGCCTTCT TTCTCGTATC
GAGAATGACA AATCGGTTCC CTCACTGGAA TCTCTTTTCG TAATTACGAA CACGATGGGG
ATCGATATCA CCACTTTCCT CACGCTGGAG ATTCCTGACG AGTTCCTGAT CAAGAAGGAG
TCTCGACAGA CTGTGACTGT CGTAAACGGC GAGGTTGAGA TAGAGGTCCA AGTTCTGACC
TTGGACAGTG AGAGTGCACT CCTCGAAGGG TTTCTCCTGA AACTTCCTCC GCGCGCATCG
GGCGGCCCGT CCATGTCTCA CGAAGGGGAA GAATTGATCT ACGTGGTCAA GGGCGAGCTT
GAGGTCACCG TCAATGATTC GACCTTTGTA GCCAAGCGTG GCGATTCACT CCACTATCCG
TCGCATTTTG ACCATACATA CCGAAACGCC AGCGACCAGG AGACGGTCGT TATCTGGATT
AACACGCCCC CACCGAAAAT ATCCCGACTA CGCAAGCCGC CATCCAACGG GGACGGTGAA
TCTCACCGGT CTGAAGATCC GATTCGGTAA
 
Protein sequence
MSGINALNVQ TSDEKGPASP FSVDQLRIGP RLKAARRLQR ITLAELSKRT SISISLLSRI 
ENDKSVPSLE SLFVITNTMG IDITTFLTLE IPDEFLIKKE SRQTVTVVNG EVEIEVQVLT
LDSESALLEG FLLKLPPRAS GGPSMSHEGE ELIYVVKGEL EVTVNDSTFV AKRGDSLHYP
SHFDHTYRNA SDQETVVIWI NTPPPKISRL RKPPSNGDGE SHRSEDPIR