Gene Meso_4574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4574 
Symbol 
ID4178701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008244 
Strand
Start bp12305 
End bp13000 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID638059454 
Productputative transcriptional regulator 
Protein accessionYP_666176 
Protein GI110347360 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGG CTGCGCGCAA ACGACGGGGC AGGGCGGACG AAGATGCCCT GTTCGATCGC 
GAGCTGGATC ACCTGCCGCC GGAAGCACGC TGGCGCGAAT GGATGCAGCG GGTCGAGGCG
ACGATTTTTG CCGCCAGCGA ACCGGTCGGG CGCGAGACGC TGGCAAAGAT CGTCGGCAAA
ACCTGCAGCA TTGATCTGCT CATCGACGAC ATCCGCGAGG AACTGCGCGG CCGGCCTTAT
GATCTCGTTG CGGTCGCCGG TGGCTGGAAA CACCTGACCC GGCCGGCCTA TGCCGACGCC
ATCCGGACGG CCGTCGGTGG AGGTGAGAAG GCGACCAACC TGACGCAGTC CGAGGTGCTG
GTGCTGATGT GCATCGGCTA TTTCCAGCCG ATCACGCGCG GAGAGCTTTC TTCCTTCTTC
GGCAAGGAAG TGTCGCGCGA CCTGATCGGC CATCTGCGCG GCGCAAAGCT GATCGCGTCG
GGACCGCGCA GCCCGACGCC GGGTGCTCCC TATACTTACG TCACGACAAA GGAGTTCCTG
CTGGAGTTCG GGCTCGACAC GCTGCGCGAC CTGCCGGATT TTGAGGCGCT AGAGGACGCC
GGGCTGTTGT CGAAGGAGAA GCTGCTGGCC GGAGACGTCA TTTCGAACTT TGCCGGCAAC
GGCGAGTCGG AAATCGGCAT GATGGCCGAT GAATAG
 
Protein sequence
MAEAARKRRG RADEDALFDR ELDHLPPEAR WREWMQRVEA TIFAASEPVG RETLAKIVGK 
TCSIDLLIDD IREELRGRPY DLVAVAGGWK HLTRPAYADA IRTAVGGGEK ATNLTQSEVL
VLMCIGYFQP ITRGELSSFF GKEVSRDLIG HLRGAKLIAS GPRSPTPGAP YTYVTTKEFL
LEFGLDTLRD LPDFEALEDA GLLSKEKLLA GDVISNFAGN GESEIGMMAD E