Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4525 |
Symbol | |
ID | 4178449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008243 |
Strand | + |
Start bp | 89188 |
End bp | 90057 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638059412 |
Product | extracellular solute-binding protein |
Protein accession | YP_666134 |
Protein GI | 110347317 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.335654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCTCG CAAACACCAA GGGAGGAGTG CTCATGAAAG GAAAAAGCCT TTATGCCGCT CTGCTGGTCG CAGCCACGCC CGGCATGTGG GGATTGTCCG CCGCTGAAGC AGGGACGCTC GATGACATCA AAGCGCGCGG AGAGTTGATC TGCGGGGTTC TCGGAAACAG CGAGCCATTC GGCTATGAAG ATCCGGGCAA CCGCCAGGTT GTCGGCTATG AGATCGATCT CTGCAAGGAC CTGGCCGGCA CCATGGACGT CACGCCAACG ATCAAGGTCA TTGCACCGCA GGCGCGCATT CCGGAATTGC AGCAGGGACG CGTCGATCTA CTCGCAGCAC TCATCTCCTA CACAAACGAG CGGGCCGAAC AGGTCGACTT CAGCAATACA TATCTGGTCG ATTCCTTCCG ATGCATGGTG AAGAAGGATT CCGGCATCAC CGGGCTCGAC GGCTTGGCGG ACAAGCGCAT CTCAGTCCAG AAGGGTGGCC TGATAGAGGC GGCTTTACGC TCGCAGTTCC CCAATGCAAC CGTCCTTTCC TATGACGATG TTTCCGAGCG TTTCGTCGCG TTCCAGCAGG GAAAGGCCGC CGCCACCTGT GACCGCGCCA CTTTGCTGCG AGCACTTCAG ATAAGAGCGA AGAACGAAGC CACCACTACC ATACTGCCCG AAGCCCTGAA CATGATGCAG AAGGCGGGCT TTGCCGTCCG CAAGGGCGAC AAGGACTTCG TCGACTACCT CAATCAGTTC CTTGCCACTT ACGAATCGTC CGGAAAGGGC CAGGCCCTCT TCGATCGCTG GGTCGGCGCT TCCTCGAATT ACGACCTGTC CCGCGACTTC AAAATGGGCG ACGACATCGC GAGTCAGTAA
|
Protein sequence | MRLANTKGGV LMKGKSLYAA LLVAATPGMW GLSAAEAGTL DDIKARGELI CGVLGNSEPF GYEDPGNRQV VGYEIDLCKD LAGTMDVTPT IKVIAPQARI PELQQGRVDL LAALISYTNE RAEQVDFSNT YLVDSFRCMV KKDSGITGLD GLADKRISVQ KGGLIEAALR SQFPNATVLS YDDVSERFVA FQQGKAAATC DRATLLRALQ IRAKNEATTT ILPEALNMMQ KAGFAVRKGD KDFVDYLNQF LATYESSGKG QALFDRWVGA SSNYDLSRDF KMGDDIASQ
|
| |